ZFX

Information ZFX

Description

This gene on the X chromosome is structurally similar to a related gene on the Y chromosome. It encodes a member of the krueppel C2H2-type zinc-finger protein family. The full-length protein contains an acidic transcriptional activation domain (AD), a nuclear localization sequence (NLS) and a DNA binding domain (DBD) consisting of 13 C2H2-type zinc fingers. Studies in mouse embryonic and adult hematopoietic stem cells showed that this gene was required as a transcriptional regulator for self-renewal of both stem cell types, but it was dispensable for growth and differentiation of their progeny. Multiple alternatively spliced transcript variants encoding different isoforms have been identified, but the full-length nature of some variants has not been determined. [provided by RefSeq, May 2010]

Full Name

zinc finger protein X-linked

Source NCBI

ReMap Statistics

Datasets
13
Biotypes
9
Peaks
933,537
Non-redundant peaks
590,281

TF Classification

Super Class
Zinc-coordinating DNA-binding domains
Class
C2H2 zinc finger factors
Familly
More than 3 adjacent zinc finger factors
Sub Familly
ZFX/ZFY factors

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000005889
UniProt
P17010
Genevisible
P17010
RefSeq
NM_001178084
Aliases
ZNF926
All peaks ZFX
Download BED file
Non redundant peaks ZFX
Download BED file
SEQUENCES ZFX
Download FASTA file
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Datasets Table for ZFX

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
ZFX HEK293T ENCODE Homo sapiens ENCSR218GSN 308,783
ZFX HEK293T GEO Homo sapiens GSE102616 507,568
ZFX K-562 ENCODE Homo sapiens ENCSR920ASP 19,077
ZFX MCF-7 ENCODE Homo sapiens ENCSR435OQD 10,011
ZFX MCF-7 GEO Homo sapiens GSE102616 23,699
ZFX LNCaP-C4-2B ENCODE Homo sapiens ENCSR027UFT 6,793
ZFX HCT-116 ENCODE Homo sapiens ENCSR503GVO 12,608
ZFX HCT-116 GEO Homo sapiens GSE102616 12,563
ZFX LNCaP-C4-2B GEO Homo sapiens GSE102616 6,798
ZFX PrEC GEO Homo sapiens GSE102616 9,067
ZFX DAOY GEO Homo sapiens GSE45394 8,393
ZFX NOMO1 GEO Homo sapiens GSE43147 7,364
ZFX RPMI8402 GEO Homo sapiens GSE43147 813
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.