ReMap 2020: a database of regulatory regions from an integrative analysis of Human and Arabidopsis DNA-binding sequencing experiments
Jeanne Chèneby, Zacharie Ménétrier, Martin Mestdagh, Thomas Rosnet, Allyssa Douida, Wassim Rhalloussi, Aurélie Bergon, Fabrice Lopez, Benoit Ballester. Nucleic Acids Research, 29 October 2019, gkz94510.1093/nar/gkz945
Jeanne Chèneby, Zacharie Ménétrier, Martin Mestdagh, Thomas Rosnet, Allyssa Douida, Wassim Rhalloussi, Aurélie Bergon, Fabrice Lopez, Benoit Ballester. Nucleic Acids Research, 29 October 2019, gkz94510.1093/nar/gkz945
Papers citing ReMap
| Year | DOI | Pubmed ID | Citation |
|---|---|---|---|
| 2015 |
|
|
Androgen receptor profiling predicts prostate cancer outcome. Stelloo S., Nevedomskaya E., van der Poel H. G., de Jong J., van Leenders G. J., Jenster G., Wessels L. F., Bergman A. M. and Zwart W. EMBO Mol Med. 2015;7(11):1450-64. Epub 2015/09/29. |
| 2015 |
|
|
By the company they keep: interaction networks define the binding ability of transcription factors. Cirillo D., Botta-Orfila T. and Tartaglia G. G. Nucleic Acids Res. 2015;43(19):e125. Epub 2015/06/20. |
| 2016 |
|
|
Differential expression of lncRNAs during the HIV replication cycle: an underestimated layer in the HIV-host interplay. Trypsteen W., Mohammadi P., Van Hecke C., Mestdagh P., Lefever S., Saeys Y., De Bleser P., Vandesompele J., Ciuffi A., Vandekerckhove L. and De Spiegelaere W. Sci Rep. 2016;6:36111. Epub 2016/10/27. |
| 2016 |
|
|
Cystic fibrosis gene modifier SLC26A9 modulates airway response to CFTR-directed therapeutics. Strug L. J., Gonska T., He G., Keenan K., Ip W., Boelle P. Y., Lin F., Panjwani N., Gong J., Li W., Soave D., Xiao B., Tullis E., Rabin H., Parkins M. D., Price A., Zuberbuhler P. C., Corvol H., Ratjen F., Sun L., Bear C. E. and Rommens J. M. Hum Mol Genet. 2016;25(20):4590-4600. Epub 2017/02/09. |
| 2016 |
|
|
LOLA: enrichment analysis for genomic region sets and regulatory elements in R and Bioconductor. Sheffield N. C. and Bock C. Bioinformatics. 2016;32(4):587-9. Epub 2015/10/29. |
| 2016 |
|
|
Topoisomerase 1 inhibition suppresses inflammatory genes and protects from death by inflammation. Rialdi A., Campisi L., Zhao N., Lagda A. C., Pietzsch C., Ho J. S. Y., Martinez-Gil L., Fenouil R., Chen X., Edwards M., Metreveli G., Jordan S., Peralta Z., Munoz-Fontela C., Bouvier N., Merad M., Jin J., Weirauch M., Heinz S., Benner C., van Bakel H., Basler C., Garcia-Sastre A., Bukreyev A. and Marazzi I. Science. 2016;352(6289):aad7993. Epub 2016/04/30. |
| 2016 |
|
|
ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline. Qin Q., Mei S., Wu Q., Sun H., Li L., Taing L., Chen S., Li F., Liu T., Zang C., Xu H., Chen Y., Meyer C. A., Zhang Y., Brown M., Long H. W. and Liu X. S. BMC Bioinformatics. 2016;17(1):404. Epub 2016/10/08. |
| 2016 |
|
|
A microRNA-328 binding site in PAX6 is associated with centrotemporal spikes of rolandic epilepsy. Panjwani N., Wilson M. D., Addis L., Crosbie J., Wirrell E., Auvin S., Caraballo R. H., Kinali M., McCormick D., Oren C., Taylor J., Trounce J., Clarke T., Akman C. I., Kugler S. L., Mandelbaum D. E., McGoldrick P., Wolf S. M., Arnold P., Schachar R., Pal D. K. and Strug L. J. Ann Clin Transl Neurol. 2016;3(7):512-22. Epub 2016/07/08. |
| 2016 |
|
|
Epigenomic profiling of primary gastric adenocarcinoma reveals super-enhancer heterogeneity. Ooi W. F., Xing M., Xu C., Yao X., Ramlee M. K., Lim M. C., Cao F., Lim K., Babu D., Poon L. F., Lin Suling J., Qamra A., Irwanto A., Qu Zhengzhong J., Nandi T., Lee-Lim A. P., Chan Y. S., Tay S. T., Lee M. H., Davies J. O., Wong W. K., Soo K. C., Chan W. H., Ong H. S., Chow P., Wong C. Y., Rha S. Y., Liu J., Hillmer A. M., Hughes J. R., Rozen S., Teh B. T., Fullwood M. J., Li S. and Tan P. Nat Commun. 2016;7:12983. Epub 2016/09/30. |
| 2016 |
|
|
Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay (EMSA) and DNA-affinity Precipitation Assay (DAPA). Miller D. E., Patel Z. H., Lu X., Lynch A. T., Weirauch M. T. and Kottyan L. C. J Vis Exp. 2016(114). Epub 2016/09/02. |
| Year | DOI | Pubmed ID | Citation |
Showing 1 to 10 of 68 entries