TP53

Information TP53

Description

This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016]

Full Name

tumor protein p53

Source NCBI

ReMap Statistics

Datasets
92
Biotypes
27
Peaks
760,657
Non-redundant peaks
297,010

TF Classification

Super Class
Immunoglobulin fold
Class
p53 domain factors
Familly
p53-related factors
Sub Familly
None

Source TFClass

External IDs

JASPAR
MA0106
Ensembl
ENSG00000141510
UniProt
P04637
Genevisible
P04637
RefSeq
NM_000546
Aliases
BCC7; BMFS5; LFS1; P53; TRP53
All peaks TP53
Download BED file
Non redundant peaks TP53
Download BED file
SEQUENCES TP53
Download FASTA file
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Datasets Table for TP53

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
TP53 BC3 ENA Homo sapiens ERP014035 87
TP53 BC3 NUT ENA Homo sapiens ERP014035 1,165
TP53 BC3 TPA_24H ENA Homo sapiens ERP014035 146
TP53 BC3 TPA_4H ENA Homo sapiens ERP014035 44
TP53 SW480 0h_TNFa GEO Homo sapiens GSE102796 48,447
TP53 SW480 16h_TNFa GEO Homo sapiens GSE102796 102,210
TP53 U2OS ENA Homo sapiens ERP004176 1,024
TP53 U2OS UV_16H ENA Homo sapiens ERP004176 2,061
TP53 U2OS UV_8H ENA Homo sapiens ERP004176 2,192
TP53 U2OS 2h_4GY GEO Homo sapiens GSE100292 253
TP53 A-549 2h_4GY GEO Homo sapiens GSE100292 2,278
TP53 A-498 2h_4GY GEO Homo sapiens GSE100292 1,824
TP53 LOX-IMVI 2h_4GY GEO Homo sapiens GSE100292 941
TP53 MALME-3 2h_4GY GEO Homo sapiens GSE100292 103
TP53 MCF-7 1h_IR_10Gy GEO Homo sapiens GSE100099 3,912
TP53 MCF-7 2-5h_IR_10Gy GEO Homo sapiens GSE100099 5,979
TP53 MCF-7 4h_IR_10Gy GEO Homo sapiens GSE100099 3,190
TP53 MCF-7 7-5h_IR_10Gy GEO Homo sapiens GSE100099 5,096
TP53 MCF-7 7-5h_IR_10Gy_Nutlin GEO Homo sapiens GSE100099 22,476
TP53 MCF-7 2h_4GY GEO Homo sapiens GSE100292 248
TP53 MCF-7 minus_Decitabine GEO Homo sapiens GSE100292 468
TP53 MCF-7 nutlin_2h GEO Homo sapiens GSE100292 1,289
TP53 MCF-7 plus_Decitabine GEO Homo sapiens GSE100292 523
TP53 MCF-7 GEO Homo sapiens GSE101737 163
TP53 MCF-7 NCS-treated GEO Homo sapiens GSE101737 2,899
TP53 NCI-H1299 ENA Homo sapiens ERP022459 269
TP53 NCI-H460 2h_4GY GEO Homo sapiens GSE100292 1,191
TP53 SaOS-2 ENA Homo sapiens ERP002038 1,553
TP53 SK-MEL-5 2h_4GY GEO Homo sapiens GSE100292 104
TP53 UACC-257 2h_4GY GEO Homo sapiens GSE100292 1,896
TP53 UACC-257 nutlin_2h GEO Homo sapiens GSE100292 538
TP53 UACC-62 2h_4GY GEO Homo sapiens GSE100292 138
TP53 UO-31 2h_4GY GEO Homo sapiens GSE100292 3,457
TP53 HCT-116 2h_4GY GEO Homo sapiens GSE100292 1,096
TP53 RPE 2h_4GY GEO Homo sapiens GSE100292 343
TP53 GM00011 GEO Homo sapiens GSE55727 11,500
TP53 GM06170 GEO Homo sapiens GSE55727 18,223
TP53 hESC DAMAGED GEO Homo sapiens GSE39912 19,584
TP53 hESC DIFF GEO Homo sapiens GSE39912 15,054
TP53 keratinocyte GEO Homo sapiens GSE56674 4,636
TP53 keratinocyte ADRIA GEO Homo sapiens GSE56674 7,891
TP53 keratinocyte CISP GEO Homo sapiens GSE56674 14,925
TP53 lymphocyte 104_Nutlin GEO Homo sapiens GSE110368 1,715
TP53 lymphocyte 116 GEO Homo sapiens GSE110368 989
TP53 lymphocyte 116_DXR GEO Homo sapiens GSE110368 2,028
TP53 lymphocyte 116_Nutlin GEO Homo sapiens GSE110368 8,180
TP53 lymphocyte 45 GEO Homo sapiens GSE110368 531
TP53 lymphocyte 45_DXR GEO Homo sapiens GSE110368 2,947
TP53 lymphocyte 45_Nutlin GEO Homo sapiens GSE110368 1,545
TP53 lymphocyte 90 GEO Homo sapiens GSE110368 7,275
TP53 lymphocyte 90_DXR GEO Homo sapiens GSE110368 2,744
TP53 lymphocyte 90_Nutlin GEO Homo sapiens GSE110368 1,508
TP53 SW480 shLacZ_16h_TNF-a GEO Homo sapiens GSE115985 108,925
TP53 SW480 shp53_16h_TNF-a GEO Homo sapiens GSE115985 35,985
TP53 SW480 GEO Homo sapiens GSE67108 12
TP53 U2OS 10Gy_2h_recovery GEO Homo sapiens GSE110800 170
TP53 U2OS 10Gy_4h_recovery GEO Homo sapiens GSE110800 227
TP53 PS15 U2OS ACTD GEO Homo sapiens GSE21939 522
TP53 PS15 U2OS ETO GEO Homo sapiens GSE21939 598
TP53 PS46 U2OS ACTD GEO Homo sapiens GSE21939 84
TP53 PS46 U2OS ETO GEO Homo sapiens GSE21939 125
TP53 U2OS ACTD GEO Homo sapiens GSE21939 550
TP53 U2OS ETO GEO Homo sapiens GSE21939 1,103
TP53 U2OS GEO Homo sapiens GSE46641 608
TP53 U2OS DMSO GEO Homo sapiens GSE46641 3,234
TP53 U2OS DXR GEO Homo sapiens GSE46641 2,397
TP53 U2OS NUT GEO Homo sapiens GSE46641 16,966
TP53 H9 GEO Homo sapiens GSE39912 2,839
TP53 Hep-G2 GEO Homo sapiens GSE64877 245
TP53 IMR-90 GEO Homo sapiens GSE115940 4,587
TP53 IMR-90 GEO Homo sapiens GSE31558 1,145
TP53 IMR-90 GEO Homo sapiens GSE42728 9,865
TP53 IMR-90 SENES_SHLUC GEO Homo sapiens GSE42728 19,659
TP53 IMR-90 SENES_SHP53 GEO Homo sapiens GSE42728 731
TP53 IMR-90 APO GEO Homo sapiens GSE53491 23,452
TP53 IMR-90 SENE GEO Homo sapiens GSE53491 5,426
TP53 IMR-90 DMSO GEO Homo sapiens GSE58740 354
TP53 IMR-90 NUT3A GEO Homo sapiens GSE58740 7,809
TP53 MCF-7 NUT GEO Homo sapiens GSE47041 209
TP53 MCF-7 nutlin GEO Homo sapiens GSE86164 34,147
TP53 SaOS-2 GEO Homo sapiens GSE15780 28,570
TP53 SaOS-2 GEO Homo sapiens GSE51268 10,885
TP53 SJSA-1 GEO Homo sapiens GSE86164 2,028
TP53 SJSA-1 nutlin GEO Homo sapiens GSE86164 10,231
TP53 HCT-116 GEO Homo sapiens GSE58506 666
TP53 HCT-116 5FU GEO Homo sapiens GSE58506 3,383
TP53 HCT-116 GEO Homo sapiens GSE58714 63
TP53 HCT-116 IR GEO Homo sapiens GSE60267 7,301
TP53 HCT-116 CAMP GEO Homo sapiens GSE74355 82
TP53 HCT-116 DMSO_KOATF3 GEO Homo sapiens GSE74355 1,049
TP53 HCT-116 nutlin GEO Homo sapiens GSE86164 5,944
TP53 MDA-MB-231 GEO Homo sapiens GSE95303 67,603
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.