TCF3

Information TCF3

Description

This gene encodes a member of the E protein (class I) family of helix-loop-helix transcription factors. E proteins activate transcription by binding to regulatory E-box sequences on target genes as heterodimers or homodimers, and are inhibited by heterodimerization with inhibitor of DNA-binding (class IV) helix-loop-helix proteins. E proteins play a critical role in lymphopoiesis, and the encoded protein is required for B and T lymphocyte development. Deletion of this gene or diminished activity of the encoded protein may play a role in lymphoid malignancies. This gene is also involved in several chromosomal translocations that are associated with lymphoid malignancies including pre-B-cell acute lymphoblastic leukemia (t(1;19), with PBX1), childhood leukemia (t(19;19), with TFPT) and acute leukemia (t(12;19), with ZNF384). Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the short arm of chromosome 9. [provided by RefSeq, Sep 2011]

Full Name

transcription factor 3

Source NCBI

ReMap Statistics

Datasets
7
Biotypes
7
Peaks
197,316
Non-redundant peaks
149,103

TF Classification

Super Class
Basic domains
Class
Basic helix-loop-helix factors (bHLH)
Familly
E2A-related factors
Sub Familly
None

Source TFClass

External IDs

JASPAR
MA0522
Ensembl
ENSG00000071564
UniProt
P15923
Genevisible
P15923
RefSeq
NM_001136139
Aliases
AGM8; E2A; E47; ITF1; MGC129647; MGC129648; TCF-3; VDIR; bHLHb21; p75
All peaks TCF3
Download BED file
Non redundant peaks TCF3
Download BED file
SEQUENCES TCF3
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for TCF3

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
TCF3 GM12878 ENCODE Homo sapiens ENCSR000BQT 62,865
TCF3 Jurkat GEO Homo sapiens GSE29180 92
TCF3 RPMI8402 GEO Homo sapiens GSE39179 1,528
TCF3 SEM GEO Homo sapiens GSE85988 6,276
TCF3 CCRF-CEM GEO Homo sapiens GSE33850 598
TCF3 Kasumi-1 GEO Homo sapiens GSE43834 75,760
TCF3 RCH-ACV GEO Homo sapiens GSE85988 50,197
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.