TBX5

Information TBX5

Description

This gene is a member of a phylogenetically conserved family of genes that share a common DNA-binding domain, the T-box. T-box genes encode transcription factors involved in the regulation of developmental processes. This gene is closely linked to related family member T-box 3 (ulnar mammary syndrome) on human chromosome 12. The encoded protein may play a role in heart development and specification of limb identity. Mutations in this gene have been associated with Holt-Oram syndrome, a developmental disorder affecting the heart and upper limbs. Several transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2008]

Full Name

T-box transcription factor 5

Source NCBI

ReMap Statistics

Datasets
7
Biotypes
2
Peaks
158,147
Non-redundant peaks
65,652

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

JASPAR
MA0807
Ensembl
ENSG00000089225
UniProt
Q99593
Genevisible
Q99593
RefSeq
NM_000192
Aliases
HOS
All peaks TBX5
Download BED file
Non redundant peaks TBX5
Download BED file
SEQUENCES TBX5
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for TBX5

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
TBX5 cardiomyocyte GEO Homo sapiens GSE85628 16,545
TBX5 cardiomyocyte 1 GEO Homo sapiens GSE85628 16,529
TBX5 cardiomyocyte 5 GEO Homo sapiens GSE85628 21,863
TBX5 cardiomyocyte 7 GEO Homo sapiens GSE85628 16,887
TBX5 G296S GEO Homo sapiens GSE85628 27,570
TBX5 G296S 2 GEO Homo sapiens GSE85628 27,552
TBX5 G296S 4 GEO Homo sapiens GSE85628 31,201
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.