SVP

Information SVP

Description

Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.

Full Name

K-box region and MADS-box transcription factor family protein

Source NCBI

ReMap Statistics

Datasets
6
Biotypes
3
Peaks
26,656
Non-redundant peaks
24,974

TF Classification

Familly
MADS
Sub Familly
MADS-box protein

Source AtTFDB

External IDs

JASPAR
MA0555
Ensembl
AT2G22540
UniProt
Q9FVC1
Genevisible
Q9FVC1
RefSeq
NM_127820.4
Aliases
All peaks SVP
Download BED file
Non redundant peaks SVP
Download BED file
SEQUENCES SVP
Download FASTA file
DOWNLOAD All ReMap
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Datasets Table for SVP

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SVP Col-0 Col-0_seedling 4d GEO Arabidopsis thaliana GSE33120 14,734
SVP Col-0 Col-0_seedling 2w-FLC GEO Arabidopsis thaliana GSE54881 8,337
SVP Col-0 Col-0_seedling 2w-flc-3 GEO Arabidopsis thaliana GSE54881 2,312
SVP Col-0 Col-0_inflorescence-flower-meristem 2w-GFP GEO Arabidopsis thaliana GSE33120 128
SVP Col-0 Col-0_inflorescence-flower-meristem 2w-wt GEO Arabidopsis thaliana GSE33120 516
SVP Col-0 Col-0_leaves tnt_col GEO Arabidopsis thaliana GSE60141 629
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.