SMC3

Information SMC3

Description

This gene belongs to the SMC3 subfamily of SMC proteins. The encoded protein occurs in certain cell types as either an intracellular, nuclear protein or a secreted protein. The nuclear form, known as structural maintenance of chromosomes 3, is a component of the multimeric cohesin complex that holds together sister chromatids during mitosis, enabling proper chromosome segregation. Post-translational modification of the encoded protein by the addition of chondroitin sulfate chains gives rise to the secreted proteoglycan bamacan, an abundant basement membrane protein. [provided by RefSeq, Jul 2008]

Full Name

structural maintenance of chromosomes 3

Source NCBI

ReMap Statistics

Datasets
21
Biotypes
13
Peaks
867,175
Non-redundant peaks
300,424

TF Classification

Super Class
Unknown
Class
Unknown
Familly
Unknown
Sub Familly
Unknown

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000108055
UniProt
Q9UQE7
Genevisible
Q9UQE7
RefSeq
NM_005445
Aliases
BAM; BMH; CDLS3; CSPG6; HCAP; SMC3L1
All peaks SMC3
Download BED file
Non redundant peaks SMC3
Download BED file
SEQUENCES SMC3
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for SMC3

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SMC3 GM12878 ENCODE Homo sapiens ENCSR000DZP 15,056
SMC3 ac HeLa ESCO2_ctrl_siRNA GEO Homo sapiens GSE105004 836
SMC3 ac HeLa ESCO2-deltaPBMA_ctrl_siRNA GEO Homo sapiens GSE105004 236
SMC3 HeLa ESCO2-deltaPBMA_ctrl_siRNA GEO Homo sapiens GSE105004 20,088
SMC3 HeLa ESCO2-deltaPBMA_ESCO1_siRNA GEO Homo sapiens GSE105004 18,488
SMC3 HeLa ESCO2_ESCO1_siRNA GEO Homo sapiens GSE105004 11,733
SMC3 neural ENCODE Homo sapiens ENCSR404BPV 48,480
SMC3 A-549 ENCODE Homo sapiens ENCSR481YWD 28,281
SMC3 Hep-G2 ENCODE Homo sapiens ENCSR000EDW 37,842
SMC3 HL-60 ENA Homo sapiens ERP008568 130,008
SMC3 IMR-90 ENCODE Homo sapiens ENCSR000HPG 59,776
SMC3 K-562 ENCODE Homo sapiens ENCSR000EGW 36,921
SMC3 SK-N-SH ENCODE Homo sapiens ENCSR000EHW 36,183
SMC3 U-937 ENA Homo sapiens ERP008568 77
SMC3 HeLa-S3 ENCODE Homo sapiens ENCSR000ECS 50,771
SMC3 HeLa-Kyoto GEO Homo sapiens GSE102884 74,610
SMC3 HeLa-Kyoto PDS5-depleted GEO Homo sapiens GSE102884 67,468
SMC3 HeLa-Kyoto WAPL-depleted GEO Homo sapiens GSE102884 86,935
SMC3 HeLa-Kyoto WAPL_PDS-depleted GEO Homo sapiens GSE102884 69,231
SMC3 GP5D GEO Homo sapiens GSE51234 60,750
SMC3 GP5D SIRAD21 GEO Homo sapiens GSE51234 13,405
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.