SMC3
Information SMC3
- Description
This gene belongs to the SMC3 subfamily of SMC proteins. The encoded protein occurs in certain cell types as either an intracellular, nuclear protein or a secreted protein. The nuclear form, known as structural maintenance of chromosomes 3, is a component of the multimeric cohesin complex that holds together sister chromatids during mitosis, enabling proper chromosome segregation. Post-translational modification of the encoded protein by the addition of chondroitin sulfate chains gives rise to the secreted proteoglycan bamacan, an abundant basement membrane protein. [provided by RefSeq, Jul 2008]
- Full Name
structural maintenance of chromosomes 3
- Source NCBI
ReMap Statistics
- Datasets
- 21
- Biotypes
- 13
- Peaks
- 867,175
- Non-redundant peaks
- 300,424
TF Classification
- Super Class
- Unknown
- Class
- Unknown
- Familly
- Unknown
- Sub Familly
- Unknown
Source TFClass
External IDs
- JASPAR
- Ensembl
- ENSG00000108055
- UniProt
- Q9UQE7
- Genevisible
- Q9UQE7
- RefSeq
- NM_005445
- Aliases
- BAM; BMH; CDLS3; CSPG6; HCAP; SMC3L1
Datasets Table for SMC3
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
SMC3 | GM12878 | ENCODE | Homo sapiens | ENCSR000DZP | 15,056 | |||
SMC3 | ac | HeLa | ESCO2_ctrl_siRNA | GEO | Homo sapiens | GSE105004 | 836 | |
SMC3 | ac | HeLa | ESCO2-deltaPBMA_ctrl_siRNA | GEO | Homo sapiens | GSE105004 | 236 | |
SMC3 | HeLa | ESCO2-deltaPBMA_ctrl_siRNA | GEO | Homo sapiens | GSE105004 | 20,088 | ||
SMC3 | HeLa | ESCO2-deltaPBMA_ESCO1_siRNA | GEO | Homo sapiens | GSE105004 | 18,488 | ||
SMC3 | HeLa | ESCO2_ESCO1_siRNA | GEO | Homo sapiens | GSE105004 | 11,733 | ||
SMC3 | neural | ENCODE | Homo sapiens | ENCSR404BPV | 48,480 | |||
SMC3 | A-549 | ENCODE | Homo sapiens | ENCSR481YWD | 28,281 | |||
SMC3 | Hep-G2 | ENCODE | Homo sapiens | ENCSR000EDW | 37,842 | |||
SMC3 | HL-60 | ENA | Homo sapiens | ERP008568 | 130,008 | |||
SMC3 | IMR-90 | ENCODE | Homo sapiens | ENCSR000HPG | 59,776 | |||
SMC3 | K-562 | ENCODE | Homo sapiens | ENCSR000EGW | 36,921 | |||
SMC3 | SK-N-SH | ENCODE | Homo sapiens | ENCSR000EHW | 36,183 | |||
SMC3 | U-937 | ENA | Homo sapiens | ERP008568 | 77 | |||
SMC3 | HeLa-S3 | ENCODE | Homo sapiens | ENCSR000ECS | 50,771 | |||
SMC3 | HeLa-Kyoto | GEO | Homo sapiens | GSE102884 | 74,610 | |||
SMC3 | HeLa-Kyoto | PDS5-depleted | GEO | Homo sapiens | GSE102884 | 67,468 | ||
SMC3 | HeLa-Kyoto | WAPL-depleted | GEO | Homo sapiens | GSE102884 | 86,935 | ||
SMC3 | HeLa-Kyoto | WAPL_PDS-depleted | GEO | Homo sapiens | GSE102884 | 69,231 | ||
SMC3 | GP5D | GEO | Homo sapiens | GSE51234 | 60,750 | |||
SMC3 | GP5D | SIRAD21 | GEO | Homo sapiens | GSE51234 | 13,405 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |