SETX

Information SETX

Description

This gene encodes a protein named for its homology to the Sen1p protein of fungi which has RNA helicase activity encoded by a domain at the C-terminal end of the protein. The protein encoded by this gene contains a DNA/RNA helicase domain at its C-terminal end which suggests that it may be involved in both DNA and RNA processing. Mutations in this gene have been associated with ataxia-ocular apraxia-2 (AOA2) and an autosomal dominant form of juvenile amyotrophic lateral sclerosis (ALS4). [provided by RefSeq, Jul 2008]

Full Name

senataxin

Source NCBI

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
11,008
Non-redundant peaks
11,008

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000107290
UniProt
Q7Z333
Genevisible
Q7Z333
RefSeq
NM_001351527
Aliases
ALS4; AOA2; KIAA0625; SCAR1; Sen1; bA479K20.2
All peaks SETX
Download BED file
Non redundant peaks SETX
Download BED file
SEQUENCES SETX
Download FASTA file
DOWNLOAD All ReMap
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Datasets Table for SETX

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SETX A-549 Influenza_PR8_NS1 GEO Homo sapiens GSE52936 11,008
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.