RBPJ

Information RBPJ

Description

The protein encoded by this gene is a transcriptional regulator important in the Notch signaling pathway. The encoded protein acts as a repressor when not bound to Notch proteins and an activator when bound to Notch proteins. It is thought to function by recruiting chromatin remodeling complexes containing histone deacetylase or histone acetylase proteins to Notch signaling pathway genes. Several transcript variants encoding different isoforms have been found for this gene, and several pseudogenes of this gene exist on chromosome 9. [provided by RefSeq, Oct 2013]

Full Name

recombination signal binding protein for immunoglobulin kappa J region

Source NCBI

ReMap Statistics

Datasets
12
Biotypes
10
Peaks
256,251
Non-redundant peaks
174,651

TF Classification

Super Class
Immunoglobulin fold
Class
Rel homology region (RHR) factors
Familly
CSL-related factors
Sub Familly
M

Source TFClass

External IDs

JASPAR
MA1116
Ensembl
ENSG00000168214
UniProt
Q06330
Genevisible
Q06330
RefSeq
NM_001363577
Aliases
AOS3; CBF1; IGKJRB; IGKJRB1; KBF2; RBP-J; RBPJK; RBPSUH; SUH; csl
All peaks RBPJ
Download BED file
Non redundant peaks RBPJ
Download BED file
SEQUENCES RBPJ
Download FASTA file
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Datasets Table for RBPJ

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
RBPJ Hep-G2 ENCODE Homo sapiens ENCSR596FEL 84,885
RBPJ HKC GEO Homo sapiens GSE102761 556
RBPJ CUTLL1 GEO Homo sapiens GSE29600 10,499
RBPJ fibroblast DERMAL GEO Homo sapiens GSE59942 6
RBPJ GIC GEO Homo sapiens GSE79734 11,227
RBPJ LCL GEO Homo sapiens GSE75503 25,233
RBPJ MUTUL GEO Homo sapiens GSE75503 26,921
RBPJ NHEK GEO Homo sapiens GSE29498 33,134
RBPJ GSC8-11 GEO Homo sapiens GSE74557 4,005
RBPJ GSC8-11 12d-das GEO Homo sapiens GSE74557 31,730
RBPJ GSC8-11 dasatinib GEO Homo sapiens GSE74557 27,257
RBPJ HUVEC-C VEGF_12h GEO Homo sapiens GSE109625 798
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.