RBM39

Information RBM39

Description

This gene encodes a member of the U2AF65 family of proteins. The encoded protein is found in the nucleus, where it co-localizes with core spliceosomal proteins. It has been shown to play a role in both steroid hormone receptor-mediated transcription and alternative splicing, and it is also a transcriptional coregulator of the viral oncoprotein v-Rel. Multiple transcript variants have been observed for this gene. A related pseudogene has been identified on chromosome X. [provided by RefSeq, Aug 2011]

Full Name

RNA binding motif protein 39

Source NCBI

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
78,154
Non-redundant peaks
73,546

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000131051
UniProt
Q14498
Genevisible
Q14498
RefSeq
NM_001242599
Aliases
CAPER; CAPERalpha; CC1.3; FSAP59; HCC1; RNPC2; fSAP59
All peaks RBM39
Download BED file
Non redundant peaks RBM39
Download BED file
SEQUENCES RBM39
Download FASTA file
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Datasets Table for RBM39

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
RBM39 Hep-G2 ENCODE Homo sapiens ENCSR339JTP 48,700
RBM39 K-562 ENCODE Homo sapiens ENCSR764OXF 29,454
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.