PRDM1
Information PRDM1
- Description
This gene encodes a protein that acts as a repressor of beta-interferon gene expression. The protein binds specifically to the PRDI (positive regulatory domain I element) of the beta-IFN gene promoter. Transcription of this gene increases upon virus induction. Two alternatively spliced transcript variants that encode different isoforms have been reported. [provided by RefSeq, Jul 2008]
- Full Name
PR/SET domain 1
- Source NCBI
ReMap Statistics
- Datasets
- 5
- Biotypes
- 4
- Peaks
- 214,986
- Non-redundant peaks
- 195,334
TF Classification
- Super Class
- Zinc-coordinating DNA-binding domains
- Class
- C2H2 zinc finger factors
- Familly
- More than 3 adjacent zinc finger factors
- Sub Familly
- PRDM1-like factors
Source TFClass
External IDs
- JASPAR
- MA0508
- Ensembl
- ENSG00000057657
- UniProt
- O75626
- Genevisible
- O75626
- RefSeq
- NM_001198
- Aliases
- BLIMP1; PRDI-BF1
Datasets Table for PRDM1
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
|---|---|---|---|---|---|---|---|---|
| PRDM1 | fetal | testis | GEO | Homo sapiens | GSE100639 | 78,548 | ||
| PRDM1 | HEK293 | ENCODE | Homo sapiens | ENCSR098YLE | 112,077 | |||
| PRDM1 | U266B1 | GEO | Homo sapiens | GSE102360 | 1,800 | |||
| PRDM1 | HeLa-S3 | ENCODE | Homo sapiens | ENCSR000ECY | 4,564 | |||
| PRDM1 | HEK293 | GEO | Homo sapiens | GSE76494 | 17,997 | |||
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |