PIF1
Information PIF1
- Description
Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.
- Full Name
phytochrome interacting factor 3-like 5
- Source NCBI
ReMap Statistics
- Datasets
- 1
- Biotypes
- 1
- Peaks
- 3,728
- Non-redundant peaks
- 3,728
TF Classification
- Familly
- bHLH
- Sub Familly
- PHYTOCHROME-INTERACTING FACTOR 1
Source AtTFDB
External IDs
- JASPAR
- MA0552
- Ensembl
- AT2G20180
- UniProt
- Q8GZM7
- Genevisible
- Q8GZM7
- RefSeq
- NM_179665.3
- Aliases
Datasets Table for PIF1
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
PIF1 | Col-0 | Col-0_seedling | 3d | GEO | Arabidopsis thaliana | GSE43283 | 3,728 | |
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |