NSD2

Information NSD2

Description

This gene encodes a protein that contains four domains present in other developmental proteins: a PWWP domain, an HMG box, a SET domain, and a PHD-type zinc finger. It is expressed ubiquitously in early development. Wolf-Hirschhorn syndrome (WHS) is a malformation syndrome associated with a hemizygous deletion of the distal short arm of chromosome 4. This gene maps to the 165 kb WHS critical region and has also been involved in the chromosomal translocation t(4;14)(p16.3;q32.3) in multiple myelomas. Alternative splicing of this gene results in multiple transcript variants encoding different isoforms. Some transcript variants are nonsense-mediated mRNA (NMD) decay candidates, hence not represented as reference sequences. [provided by RefSeq, Jul 2008]

Full Name

nuclear receptor binding SET domain protein 2

Source NCBI

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
7,348
Non-redundant peaks
7,348

TF Classification

Super Class
Other all-alpha-helical DNA-binding domains
Class
High-mobility group (HMG) domain factors
Familly
WHSC1-related factors
Sub Familly
None

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000109685
UniProt
O96028
Genevisible
O96028
RefSeq
NM_001042424
Aliases
KMT3F; KMT3G; MMSET; REIIBP; TRX5; WHS; WHSC1
All peaks NSD2
Download BED file
Non redundant peaks NSD2
Download BED file
SEQUENCES NSD2
Download FASTA file
DOWNLOAD All ReMap
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Datasets Table for NSD2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
NSD2 K-562 ENCODE Homo sapiens ENCSR000AVE 7,348
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.