NR3C1

Information NR3C1

Description

This gene encodes glucocorticoid receptor, which can function both as a transcription factor that binds to glucocorticoid response elements in the promoters of glucocorticoid responsive genes to activate their transcription, and as a regulator of other transcription factors. This receptor is typically found in the cytoplasm, but upon ligand binding, is transported into the nucleus. It is involved in inflammatory responses, cellular proliferation, and differentiation in target tissues. Mutations in this gene are associated with generalized glucocorticoid resistance. Alternative splicing of this gene results in transcript variants encoding either the same or different isoforms. Additional isoforms resulting from the use of alternate in-frame translation initiation sites have also been described, and shown to be functional, displaying diverse cytoplasm-to-nucleus trafficking patterns and distinct transcriptional activities (PMID:15866175). [provided by RefSeq, Feb 2011]

Full Name

nuclear receptor subfamily 3 group C member 1

Source NCBI

ReMap Statistics

Datasets
68
Biotypes
21
Peaks
1,379,245
Non-redundant peaks
455,892

TF Classification

Super Class
Zinc-coordinating DNA-binding domains
Class
Nuclear receptors with C4 zinc fingers
Familly
Steroid hormone receptors (NR3)
Sub Familly
GR-like receptors (NR3C)

Source TFClass

External IDs

JASPAR
MA0113
Ensembl
ENSG00000113580
UniProt
P04150
Genevisible
P04150
RefSeq
NM_000176
Aliases
GCCR; GCR; GCRST; GR; GRL
All peaks NR3C1
Download BED file
Non redundant peaks NR3C1
Download BED file
SEQUENCES NR3C1
Download FASTA file
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Datasets Table for NR3C1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
NR3C1 breast tumor_Male_1 GEO Homo sapiens GSE104399 5,982
NR3C1 breast tumor_Male_12 GEO Homo sapiens GSE104399 1,912
NR3C1 breast tumor_Male_15 GEO Homo sapiens GSE104399 10,996
NR3C1 breast tumor_Male_21 GEO Homo sapiens GSE104399 24,140
NR3C1 breast tumor_Male_9 GEO Homo sapiens GSE104399 5,395
NR3C1 GM12878 ENCODE Homo sapiens ENCSR904YPP 15,752
NR3C1 Ishikawa ENCODE Homo sapiens ENCSR000BJC 56,562
NR3C1 Ishikawa ENCODE Homo sapiens ENCSR000BLB 8,158
NR3C1 U2OS GLUCC ENA Homo sapiens ERP007081 50,776
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BHE 15,614
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BHF 79,632
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BHG 37,434
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BIO 240
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BJR 77,012
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BJT 8,579
NR3C1 A-549 ENCODE Homo sapiens ENCSR116TFA 12,053
NR3C1 Hep-G2 ENCODE Homo sapiens ENCSR000EEV 351
NR3C1 IMR-90 GLUCC ENA Homo sapiens ERP007081 42,052
NR3C1 IMR-90 ENA Homo sapiens ERP007093 44,780
NR3C1 K-562 ENCODE Homo sapiens ENCSR325DER 654
NR3C1 K-562 ENCODE Homo sapiens ENCSR494UQJ 1,636
NR3C1 K-562 GLUCC ENA Homo sapiens ERP007081 18,649
NR3C1 MCF-10A DEX_20min GEO Homo sapiens GSE102355 5,897
NR3C1 MCF-10A DEX_60min GEO Homo sapiens GSE102355 12,221
NR3C1 MCF-10A EGF_DEX_20min GEO Homo sapiens GSE102355 11,806
NR3C1 MCF-10A EGF_DEX_60min GEO Homo sapiens GSE102355 9,215
NR3C1 MCF-7 GEO Homo sapiens GSE104399 7,842
NR3C1 hMSC DMI GEO Homo sapiens GSE68864 5,682
NR3C1 Ishikawa GEO Homo sapiens GSE109891 1,768
NR3C1 Ishikawa Dex GEO Homo sapiens GSE109891 12,076
NR3C1 Ishikawa Dex_E2 GEO Homo sapiens GSE109891 8,085
NR3C1 LCL DEX GEO Homo sapiens GSE45638 3,173
NR3C1 LCL ETOH GEO Homo sapiens GSE45638 158
NR3C1 LNCaP 1F5 GEO Homo sapiens GSE30623 10,779
NR3C1 LNCaP 1F5_SIFOXA1 GEO Homo sapiens GSE30623 16,661
NR3C1 U2OS siBRMsiHic5 GEO Homo sapiens GSE109383 8,369
NR3C1 U2OS siHic5siNS GEO Homo sapiens GSE109383 17,034
NR3C1 U2OS SHHIC5 GEO Homo sapiens GSE65847 55,014
NR3C1 U2OS SHNS GEO Homo sapiens GSE65847 16,961
NR3C1 ZR751 GEO Homo sapiens GSE72249 4,607
NR3C1 ZR751 DEX GEO Homo sapiens GSE72249 19,479
NR3C1 MCF-7 GEO Homo sapiens GSE72249 791
NR3C1 MCF-7 DEX GEO Homo sapiens GSE72249 13,790
NR3C1 MCF-7 E2_Dex GEO Homo sapiens GSE81510 41,127
NR3C1 MCF-7 ICI_Dex GEO Homo sapiens GSE81510 34,297
NR3C1 mut MCF-7 E2_Dex GEO Homo sapiens GSE81510 18,754
NR3C1 mut MCF-7 ICI_Dex GEO Homo sapiens GSE81510 24,531
NR3C1 NALM-6 GEO Homo sapiens GSE67046 15,825
NR3C1 NALM-6 CASP1 GEO Homo sapiens GSE67046 5,337
NR3C1 T-47D GEO Homo sapiens GSE72249 159
NR3C1 T-47D DEX GEO Homo sapiens GSE72249 733
NR3C1 HeLa-B2 DMSO GEO Homo sapiens GSE24518 451
NR3C1 HeLa-B2 GRKD_DMSO GEO Homo sapiens GSE24518 14,499
NR3C1 HeLa-B2 GRKD_TA_TNFA GEO Homo sapiens GSE24518 15,536
NR3C1 HeLa-B2 P65KD_DMSO GEO Homo sapiens GSE24518 9,108
NR3C1 HeLa-B2 P65KD_TA_TNFA GEO Homo sapiens GSE24518 29,090
NR3C1 HeLa-B2 TA GEO Homo sapiens GSE24518 11,131
NR3C1 HeLa-B2 TA_TNFA GEO Homo sapiens GSE24518 9,264
NR3C1 HeLa-B2 TNFA GEO Homo sapiens GSE24518 438
NR3C1 MM1-S GEO Homo sapiens GSE63209 28
NR3C1 MM1-S DEX GEO Homo sapiens GSE63209 21
NR3C1 RS4-11 DEX GEO Homo sapiens GSE71616 1,123
NR3C1 THP-1 GEO Homo sapiens GSE99887 871
NR3C1 THP-1 Dex GEO Homo sapiens GSE99887 16,037
NR3C1 HASM2 Dex GEO Homo sapiens GSE95632 99,252
NR3C1 HASM2 Dex-GFP GEO Homo sapiens GSE95632 86,177
NR3C1 HASM2 Dex-KLF115 GEO Homo sapiens GSE95632 95,115
NR3C1 HASM2 EtOH GEO Homo sapiens GSE95632 90,574
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

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This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.