NR3C1

Information NR3C1

Description

This gene encodes glucocorticoid receptor, which can function both as a transcription factor that binds to glucocorticoid response elements in the promoters of glucocorticoid responsive genes to activate their transcription, and as a regulator of other transcription factors. This receptor is typically found in the cytoplasm, but upon ligand binding, is transported into the nucleus. It is involved in inflammatory responses, cellular proliferation, and differentiation in target tissues. Mutations in this gene are associated with generalized glucocorticoid resistance. Alternative splicing of this gene results in transcript variants encoding either the same or different isoforms. Additional isoforms resulting from the use of alternate in-frame translation initiation sites have also been described, and shown to be functional, displaying diverse cytoplasm-to-nucleus trafficking patterns and distinct transcriptional activities (PMID:15866175). [provided by RefSeq, Feb 2011]

Full Name

nuclear receptor subfamily 3 group C member 1

Source NCBI

ReMap Statistics

Datasets
68
Biotypes
21
Peaks
1,379,245
Non-redundant peaks
455,892

TF Classification

Super Class
Zinc-coordinating DNA-binding domains
Class
Nuclear receptors with C4 zinc fingers
Familly
Steroid hormone receptors (NR3)
Sub Familly
GR-like receptors (NR3C)

Source TFClass

External IDs

JASPAR
MA0113
Ensembl
ENSG00000113580
UniProt
P04150
Genevisible
P04150
RefSeq
NM_000176
Aliases
GCCR; GCR; GCRST; GR; GRL
All peaks NR3C1
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Non redundant peaks NR3C1
Download BED file
SEQUENCES NR3C1
Download FASTA file
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Datasets Table for NR3C1

Target nameTarget modificationEcotype/StrainBiotypeBiotype modificationSourceSpeciesExperimentPeaks
NR3C1 breast tumor_Male_1 GEO Homo sapiens GSE104399 5,982
NR3C1 breast tumor_Male_12 GEO Homo sapiens GSE104399 1,912
NR3C1 breast tumor_Male_15 GEO Homo sapiens GSE104399 10,996
NR3C1 breast tumor_Male_21 GEO Homo sapiens GSE104399 24,140
NR3C1 breast tumor_Male_9 GEO Homo sapiens GSE104399 5,395
NR3C1 GM12878 ENCODE Homo sapiens ENCSR904YPP 15,752
NR3C1 Ishikawa ENCODE Homo sapiens ENCSR000BJC 56,562
NR3C1 Ishikawa ENCODE Homo sapiens ENCSR000BLB 8,158
NR3C1 U2OS GLUCC ENA Homo sapiens ERP007081 50,776
NR3C1 A-549 ENCODE Homo sapiens ENCSR000BHE 15,614
Target nameTarget modificationEcotype/StrainBiotypeBiotype modificationSourceSpeciesExperimentPeaks
Showing 1 to 10 of 68 entries

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.