NIPBL
Information NIPBL
- Description
This gene encodes the homolog of the Drosophila melanogaster Nipped-B gene product and fungal Scc2-type sister chromatid cohesion proteins. The Drosophila protein facilitates enhancer-promoter communication of remote enhancers and plays a role in developmental regulation. It is also homologous to a family of chromosomal adherins with broad roles in sister chromatid cohesion, chromosome condensation, and DNA repair. The human protein has a bipartite nuclear targeting sequence and a putative HEAT repeat. Condensins, cohesins and other complexes with chromosome-related functions also contain HEAT repeats. Mutations in this gene result in Cornelia de Lange syndrome, a disorder characterized by dysmorphic facial features, growth delay, limb reduction defects, and cognitive disability. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
- Full Name
NIPBL cohesin loading factor
- Source NCBI
ReMap Statistics
- Datasets
- 15
- Biotypes
- 9
- Peaks
- 184,778
- Non-redundant peaks
- 106,079
TF Classification
- Super Class
- Unknown
- Class
- Unknown
- Familly
- Unknown
- Sub Familly
- Unknown
Source TFClass
External IDs
- JASPAR
- Ensembl
- ENSG00000164190
- UniProt
- Q6KC79
- Genevisible
- Q6KC79
- RefSeq
- NM_015384
- Aliases
- CDLS; CDLS1; DKFZp434L1319; FLJ11203; FLJ12597; FLJ13354; FLJ13648; IDN3; IDN3-B; Scc2
Datasets Table for NIPBL
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
NIPBL | WA09 | GEO | Homo sapiens | GSE105028 | 4,138 | |||
NIPBL | WA09 | heat-shock | GEO | Homo sapiens | GSE105028 | 2,071 | ||
NIPBL | HCT-116 | RAD21-mAC | GEO | Homo sapiens | GSE104888 | 29,774 | ||
NIPBL | HCT-116 | RAD21-mAC_500uM_auxin | GEO | Homo sapiens | GSE104888 | 33,525 | ||
NIPBL | GM12878 | GEO | Homo sapiens | GSE93080 | 25,070 | |||
NIPBL | GP5D | GEO | Homo sapiens | GSE51234 | 26,531 | |||
NIPBL | GP5D | SIRAD21 | GEO | Homo sapiens | GSE51234 | 4,500 | ||
NIPBL | hESC | GEO | Homo sapiens | GSE64758 | 3,857 | |||
NIPBL | hESC | activin | GEO | Homo sapiens | GSE64758 | 4,367 | ||
NIPBL | hESC | WNT3A | GEO | Homo sapiens | GSE64758 | 4,106 | ||
NIPBL | hESC | WNT3A_ACTIVIN | GEO | Homo sapiens | GSE64758 | 7,923 | ||
NIPBL | LCL | GEO | Homo sapiens | GSE38395 | 11,191 | |||
NIPBL | A-549 | GEO | Homo sapiens | GSE76893 | 13,317 | |||
NIPBL | Hep-G2 | GEO | Homo sapiens | GSE76893 | 7,549 | |||
NIPBL | MCF-7 | GEO | Homo sapiens | GSE76893 | 6,859 | |||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |