NELFA

Information NELFA

Description

This gene is expressed ubiquitously with higher levels in fetal than in adult tissues. It encodes a protein sharing 93% sequence identity with the mouse protein. Wolf-Hirschhorn syndrome (WHS) is a malformation syndrome associated with a hemizygous deletion of the distal short arm of chromosome 4. This gene is mapped to the 165 kb WHS critical region, and may play a role in the phenotype of the WHS or Pitt-Rogers-Danks syndrome. The encoded protein is found to be capable of reacting with HLA-A2-restricted and tumor-specific cytotoxic T lymphocytes, suggesting a target for use in specific immunotherapy for a large number of cancer patients. This protein has also been shown to be a member of the NELF (negative elongation factor) protein complex that participates in the regulation of RNA polymerase II transcription elongation. [provided by RefSeq, Jul 2008]

Full Name

negative elongation factor complex member A

Source NCBI

ReMap Statistics

Datasets
13
Biotypes
2
Peaks
101,181
Non-redundant peaks
20,892

TF Classification

Super Class
Unknown
Class
Unknown
Familly
Unknown
Sub Familly
Unknown

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000185049
UniProt
Q9H3P2
Genevisible
Q9H3P2
RefSeq
NM_005663
Aliases
NELF-A; P/OKcl.15; WHSC2
All peaks NELFA
Download BED file
Non redundant peaks NELFA
Download BED file
SEQUENCES NELFA
Download FASTA file
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Datasets Table for NELFA

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
NELFA HeLa Flavo-0-H2O2 GEO Homo sapiens GSE100742 9,950
NELFA HeLa Flavo-10min-H2O2 GEO Homo sapiens GSE100742 4,228
NELFA HeLa Flavo-35min-H2O2 GEO Homo sapiens GSE100742 12,149
NELFA HeLa Flavo-PJ34-0-H2O2 GEO Homo sapiens GSE100742 6,027
NELFA HeLa Flavo-PJ34-10min-H2O2 GEO Homo sapiens GSE100742 7,052
NELFA BT-474 ENA Homo sapiens ERP010664 5,560
NELFA BT-474 INHHDAC ENA Homo sapiens ERP010664 12,056
NELFA HeLa 1h-Flavo-0-H2O2 GEO Homo sapiens GSE93931 9,783
NELFA HeLa 1h_Flavo-35min-H2O2 GEO Homo sapiens GSE93931 11,907
NELFA HeLa 40min-Flavo-0-H2O2 GEO Homo sapiens GSE93931 5,162
NELFA HeLa 40min-Flavo-10min-H2O2 GEO Homo sapiens GSE93931 4,228
NELFA HeLa 40min-Flavo-PJ34-0-H2O2 GEO Homo sapiens GSE93931 6,027
NELFA HeLa 40min-Flavo-PJ34-10min-H2O2 GEO Homo sapiens GSE93931 7,052
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.