MBD1
Information MBD1
- Description
The protein encoded by this gene is a member of a family of nuclear proteins related by the presence of a methyl-CpG binding domain (MBD). These proteins are capable of binding specifically to methylated DNA, and some members can also repress transcription from methylated gene promoters. This protein contains multiple domains: MBD at the N-terminus that functions both in binding to methylated DNA and in protein interactions; several CXXC-type zinc finger domains that mediate binding to non-methylated CpG dinucleotides; transcriptional repression domain (TRD) at the C-terminus that is involved in transcription repression and in protein interactions. Numerous alternatively spliced transcript variants encoding different isoforms have been noted for this gene.[provided by RefSeq, Feb 2011]
- Full Name
methyl-CpG binding domain protein 1
- Source NCBI
ReMap Statistics
- Datasets
- 2
- Biotypes
- 1
- Peaks
- 35,551
- Non-redundant peaks
- 26,238
TF Classification
- Super Class
- Zinc-coordinating DNA-binding domains
- Class
- CXXC zinc finger factors
- Familly
- CpG-binding proteins
- Sub Familly
- None
Source TFClass
External IDs
- JASPAR
- Ensembl
- ENSG00000141644
- UniProt
- Q9UIS9
- Genevisible
- Q9UIS9
- RefSeq
- NM_001204136
- Aliases
- CXXC3; PCM1; RFT
Datasets Table for MBD1
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
MBD1 | Hep-G2 | ENCODE | Homo sapiens | ENCSR260UJI | 20,908 | |||
MBD1 | ISOF1 | Hep-G2 | ENCODE | Homo sapiens | ENCSR396QWK | 14,643 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |