IKZF1
Information IKZF1
- Description
This gene encodes a transcription factor that belongs to the family of zinc-finger DNA-binding proteins associated with chromatin remodeling. The expression of this protein is restricted to the fetal and adult hemo-lymphopoietic system, and it functions as a regulator of lymphocyte differentiation. Several alternatively spliced transcript variants encoding different isoforms have been described for this gene. Most isoforms share a common C-terminal domain, which contains two zinc finger motifs that are required for hetero- or homo-dimerization, and for interactions with other proteins. The isoforms, however, differ in the number of N-terminal zinc finger motifs that bind DNA and in nuclear localization signal presence, resulting in members with and without DNA-binding properties. Only a few isoforms contain the requisite three or more N-terminal zinc motifs that confer high affinity binding to a specific core DNA sequence element in the promoters of target genes. The non-DNA-binding isoforms are largely found in the cytoplasm, and are thought to function as dominant-negative factors. Overexpression of some dominant-negative isoforms have been associated with B-cell malignancies, such as acute lymphoblastic leukemia (ALL). [provided by RefSeq, May 2014]
- Full Name
IKAROS family zinc finger 1
- Source NCBI
ReMap Statistics
- Datasets
- 9
- Biotypes
- 5
- Peaks
- 362,190
- Non-redundant peaks
- 208,952
TF Classification
- Super Class
- Zinc-coordinating DNA-binding domains
- Class
- C2H2 zinc finger factors
- Familly
- Factors with multiple dispersed zinc fingers
- Sub Familly
- Ikaros
Source TFClass
External IDs
- JASPAR
- Ensembl
- ENSG00000185811
- UniProt
- Q13422
- Genevisible
- Q13422
- RefSeq
- NM_001220765
- Aliases
- CVID13; Hs.54452; IK1; IKAROS; LYF1; LyF-1; PPP1R92; PRO0758; ZNFN1A1; hIk-1
Datasets Table for IKZF1
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
IKZF1 | GM12878 | ENCODE | Homo sapiens | ENCSR000EUJ | 1,006 | |||
IKZF1 | GM12878 | ENCODE | Homo sapiens | ENCSR441VHN | 83,804 | |||
IKZF1 | GM12878 | ENCODE | Homo sapiens | ENCSR874AFU | 86,020 | |||
IKZF1 | Hep-G2 | ENCODE | Homo sapiens | ENCSR278JQG | 3,536 | |||
IKZF1 | K-562 | ENCODE | Homo sapiens | ENCSR395HWC | 73,796 | |||
IKZF1 | K-562 | ENCODE | Homo sapiens | ENCSR948VFL | 82,095 | |||
IKZF1 | HSPC | GEO | Homo sapiens | GSE26014 | 1,682 | |||
IKZF1 | BCR-ABL1 | GEO | Homo sapiens | GSE58825 | 7,935 | |||
IKZF1 | BCR-ABL1 | LAX2 | GEO | Homo sapiens | GSE58825 | 22,316 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |