HY5

Information HY5

Description

Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.

Full Name

Basic-leucine zipper (bZIP) transcription factor family protein

Source NCBI

ReMap Statistics

Datasets
3
Biotypes
2
Peaks
29,039
Non-redundant peaks
17,651

TF Classification

Familly
REM
Sub Familly
NA

Source AtTFDB

External IDs

JASPAR
MA0551
Ensembl
AT5G11260
UniProt
O24646
Genevisible
O24646
RefSeq
NM_121164.5
Aliases
All peaks HY5
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Non redundant peaks HY5
Download BED file
SEQUENCES HY5
Download FASTA file
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Datasets Table for HY5

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
HY5 Ws Ws_whole-plant 10d-blue-light GEO Arabidopsis thaliana GSE117797 14,500
HY5 Ws Ws_whole-plant 10d-red-light GEO Arabidopsis thaliana GSE117797 9,536
HY5 Col-0 Col-0_leaves tnt_colamp GEO Arabidopsis thaliana GSE60141 5,003
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.