HOXC5
Information HOXC5
- Description
This gene belongs to the homeobox family of genes. The homeobox genes encode a highly conserved family of transcription factors that play an important role in morphogenesis in all multicellular organisms. Mammals possess four similar homeobox gene clusters, HOXA, HOXB, HOXC and HOXD, which are located on different chromosomes and consist of 9 to 11 genes arranged in tandem. This gene, HOXC5, is one of several homeobox HOXC genes located in a cluster on chromosome 12. Three genes, HOXC5, HOXC4 and HOXC6, share a 5' non-coding exon. Transcripts may include the shared exon spliced to the gene-specific exons, or they may include only the gene-specific exons. Two alternatively spliced variants have been described for HOXC5. The transcript variant which includes the shared exon apparently doesn't encode a protein. The protein-coding transcript variant contains gene-specific exons only. [provided by RefSeq, Jul 2008]
- Full Name
homeobox C5
- Source NCBI
ReMap Statistics
- Datasets
- 2
- Biotypes
- 1
- Peaks
- 87,054
- Non-redundant peaks
- 84,724
TF Classification
- Super Class
- NA
- Class
- NA
- Familly
- NA
- Sub Familly
- NA
Source TFClass
External IDs
- JASPAR
- Ensembl
- ENSG00000172789
- UniProt
- Q00444
- Genevisible
- Q00444
- RefSeq
- NM_018953
- Aliases
- CP11; HOX3; HOX3D
Datasets Table for HOXC5
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
HOXC5 | PC-3 | GEO | Homo sapiens | GSE97570 | 84,072 | |||
HOXC5 | PC-3 | Hoxc5overexp | GEO | Homo sapiens | GSE97570 | 2,982 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |