H3

Information H3

Description

Histone H3 is a core subunit of the eukaryotic nucleosome complex. Histones are basic nuclear proteins responsible for the nucleosome structure of chromatin. Repeating nucleosome units contain two molecules each of Histones H2A, H2B, H3, and H4 that form an octamer complex around which approximately 146 base pairs of DNA is wrapped. Linker Histone H1 interacts with DNA between nucleosome units in mediating chromatin compaction into higher order structures.

Full Name

Histone H3

Source NCBI

ReMap Statistics

Datasets
40
Biotypes
10
Peaks
796,404
Non-redundant peaks
161,975

TF Classification

Familly
REM
Sub Familly
NA

Source AtTFDB

External IDs

JASPAR
Ensembl
UniProt
Genevisible
RefSeq
Aliases
Histone H3
All peaks H3
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Non redundant peaks H3
Download BED file
SEQUENCES H3
Download FASTA file
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Datasets Table for H3

Target nameTarget modificationEcotype/StrainBiotypeBiotype modificationSourceSpeciesExperimentPeaks
H3 Col-x-Ler Col-x-Ler_endosperm 20d-1 GEO Arabidopsis thaliana GSE66585 342
H3 Col-0 Col-0_rosette-leaves 21d-wt-watered GEO Arabidopsis thaliana GSE68370 33,501
H3 Col-0 Col-0_rosette-leaves 21d-wt-drought GEO Arabidopsis thaliana GSE68370 33,789
H3 Col-0 Col-0_rosette-leaves 21d-mutant-watered GEO Arabidopsis thaliana GSE68370 23,260
H3 Col-0 Col-0_rosette-leaves 21d-mutant-drought GEO Arabidopsis thaliana GSE68370 23,822
H3 Col-0 Col-0_rosette-leaves GEO Arabidopsis thaliana GSE22276 0
H3 Col-0 Col-0_old-leaves 4w GEO Arabidopsis thaliana GSE36629 5,156
H3 Col-0 Col-0_meristem-young-leaves 4w GEO Arabidopsis thaliana GSE36629 9,961
H3 Col-0 Col-0_flower 5w-mutant GEO Arabidopsis thaliana GSE106942 33,739
H3 Col-0 Col-0_aerial-part 6d-wt GEO Arabidopsis thaliana GSE103924 17,151
Target nameTarget modificationEcotype/StrainBiotypeBiotype modificationSourceSpeciesExperimentPeaks
Showing 1 to 10 of 40 entries

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

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AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.