GATA1

Information GATA1

Description

This gene encodes a protein which belongs to the GATA family of transcription factors. The protein plays an important role in erythroid development by regulating the switch of fetal hemoglobin to adult hemoglobin. Mutations in this gene have been associated with X-linked dyserythropoietic anemia and thrombocytopenia. [provided by RefSeq, Jul 2008]

Full Name

GATA binding protein 1

Source NCBI

ReMap Statistics

Datasets
16
Biotypes
7
Peaks
749,630
Non-redundant peaks
323,946

TF Classification

Super Class
Zinc-coordinating DNA-binding domains
Class
Other C4 zinc finger-type factors
Familly
GATA-type zinc fingers
Sub Familly
Two zinc-finger GATA factors

Source TFClass

External IDs

JASPAR
MA0140
Ensembl
ENSG00000102145
UniProt
P15976
Genevisible
P15976
RefSeq
NM_002049
Aliases
ERYF1; GATA-1; GF-1; GF1; NF-E1; NFE1; XLANP; XLTDA; XLTT
All peaks GATA1
Download BED file
Non redundant peaks GATA1
Download BED file
SEQUENCES GATA1
Download FASTA file
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Datasets Table for GATA1

Target nameTarget modificationEcotype/StrainBiotypeBiotype modificationSourceSpeciesExperimentPeaks
GATA1 CD34 Day7_30min GEO Homo sapiens GSE104676 63,191
GATA1 CD34 Day9_30min GEO Homo sapiens GSE104676 9,204
GATA1 CHRF28811 ENA Homo sapiens ERP008568 112
GATA1 erythroblast ENCODE Homo sapiens ENCSR000EXP 41,015
GATA1 HUDEP-2 30min GEO Homo sapiens GSE104676 50,129
GATA1 K-562 ENCODE Homo sapiens ENCSR000EFT 17,222
GATA1 K-562 ENCODE Homo sapiens ENCSR000EWM 10,873
GATA1 K-562 GEO Homo sapiens GSE107726 66,089
GATA1 K-562 MYO1D-Hub_KO GEO Homo sapiens GSE107726 3,420
GATA1 K-562 MYO1D-Non-hub_KO GEO Homo sapiens GSE107726 4,631
Target nameTarget modificationEcotype/StrainBiotypeBiotype modificationSourceSpeciesExperimentPeaks
Showing 1 to 10 of 16 entries

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.