ETV1

Information ETV1

Description

This gene encodes a member of the ETS (E twenty-six) family of transcription factors. The ETS proteins regulate many target genes that modulate biological processes like cell growth, angiogenesis, migration, proliferation and differentiation. All ETS proteins contain an ETS DNA-binding domain that binds to DNA sequences containing the consensus 5'-CGGA[AT]-3'. The protein encoded by this gene contains a conserved short acidic transactivation domain (TAD) in the N-terminal region, in addition to the ETS DNA-binding domain in the C-terminal region. This gene is involved in chromosomal translocations, which result in multiple fusion proteins including EWS-ETV1 in Ewing sarcoma and at least 10 ETV1 partners (see PMID: 19657377, Table 1) in prostate cancer. In addition to chromosomal rearrangement, this gene is overexpressed in prostate cancer, melanoma and gastrointestinal stromal tumor. Multiple alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2016]

Full Name

ETS variant 1

Source NCBI

ReMap Statistics

Datasets
12
Biotypes
10
Peaks
191,639
Non-redundant peaks
105,394

TF Classification

Super Class
Helix-turn-helix domains
Class
Tryptophan cluster factors
Familly
Ets-related factors
Sub Familly
Elk-like factors

Source TFClass

External IDs

JASPAR
MA0761
Ensembl
ENSG00000006468
UniProt
P50549
Genevisible
P50549
RefSeq
NM_001163147
Aliases
ER81
All peaks ETV1
Download BED file
Non redundant peaks ETV1
Download BED file
SEQUENCES ETV1
Download FASTA file
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Datasets Table for ETV1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
ETV1 GIST-T1 GEO Homo sapiens GSE106624 42,115
ETV1 GIST48 iFOXF1 GEO Homo sapiens GSE106624 841
ETV1 GIST48 siSCR GEO Homo sapiens GSE106624 3,378
ETV1 K-562 ENCODE Homo sapiens ENCSR277DMR 12,255
ETV1 MDA-Pca-2b GEO Homo sapiens GSE106624 33,696
ETV1 GIST GEO Homo sapiens GSE22441 21,888
ETV1 LNCaP GEO Homo sapiens GSE47120 24,354
ETV1 A-375 GEO Homo sapiens GSE80443 6,084
ETV1 GIST-T1 GEO Homo sapiens GSE80443 14,557
ETV1 GIST882 GEO Homo sapiens GSE80443 4,356
ETV1 RWPE-1 FLAG GEO Homo sapiens GSE29808 1,164
ETV1 COLO-800 GEO Homo sapiens GSE80443 26,951
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.