CHD1

Information CHD1

Description

The CHD family of proteins is characterized by the presence of chromo (chromatin organization modifier) domains and SNF2-related helicase/ATPase domains. CHD genes alter gene expression possibly by modification of chromatin structure thus altering access of the transcriptional apparatus to its chromosomal DNA template. [provided by RefSeq, Jul 2008]

Full Name

chromodomain helicase DNA binding protein 1

Source NCBI

ReMap Statistics

Datasets
14
Biotypes
9
Peaks
242,801
Non-redundant peaks
136,882

TF Classification

Super Class
Unknown
Class
Unknown
Familly
Unknown
Sub Familly
Unknown

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000153922
UniProt
O14646
Genevisible
O14646
RefSeq
NM_001270
Aliases
CHD-1; PILBOS
All peaks CHD1
Download BED file
Non redundant peaks CHD1
Download BED file
SEQUENCES CHD1
Download FASTA file
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Datasets Table for CHD1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
CHD1 GM12878 ENCODE Homo sapiens ENCSR000DZE 618
CHD1 A-549 ENCODE Homo sapiens ENCSR398YBM 20,480
CHD1 IMR-90 ENCODE Homo sapiens ENCSR000EFC 26,051
CHD1 K-562 ENCODE Homo sapiens ENCSR000AQD 15,216
CHD1 MCF-7 ENCODE Homo sapiens ENCSR360JOC 14,668
CHD1 WA01 ENCODE Homo sapiens ENCSR000AQK 36,704
CHD1 WA01 ENCODE Homo sapiens ENCSR000EBU 5,409
CHD1 HeLa-S3 ENCODE Homo sapiens ENCSR392EAA 40,141
CHD1 LNCaP GEO Homo sapiens GSE64528 5,891
CHD1 LNCaP DHT GEO Homo sapiens GSE64528 5,825
CHD1 LNCaP DHT_KDCHD1 GEO Homo sapiens GSE64528 8
CHD1 hMSC-TERT GEO Homo sapiens GSE89179 39,469
CHD1 hMSC-TERT adipocyte GEO Homo sapiens GSE89179 3,250
CHD1 hMSC-TERT osteoblast GEO Homo sapiens GSE89179 29,071
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.