CBX5
Information CBX5
- Description
 This gene encodes a highly conserved nonhistone protein, which is a member of the heterochromatin protein family. The protein is enriched in the heterochromatin and associated with centromeres. The protein has a single N-terminal chromodomain which can bind to histone proteins via methylated lysine residues, and a C-terminal chromo shadow-domain (CSD) which is responsible for the homodimerization and interaction with a number of chromatin-associated nonhistone proteins. The encoded product is involved in the formation of functional kinetochore through interaction with essential kinetochore proteins. The gene has a pseudogene located on chromosome 3. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]
- Full Name
 chromobox 5
- Source NCBI
 
ReMap Statistics
- Datasets
 - 2
 - Biotypes
 - 2
 - Peaks
 - 22,254
 - Non-redundant peaks
 - 19,997
 
TF Classification
- Super Class
 - NA
 - Class
 - NA
 - Familly
 - NA
 - Sub Familly
 - NA
 
Source TFClass
External IDs
- JASPAR
 - Ensembl
 - ENSG00000094916
 - UniProt
 - P45973
 - Genevisible
 - P45973
 - RefSeq
 - NM_001127321
 - Aliases
 - HEL25; HP1; HP1-ALPHA; HP1A; HP1Hs-alpha
 
Datasets Table for CBX5
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks | 
|---|---|---|---|---|---|---|---|---|
| CBX5 | GM12878 | ENCODE | Homo sapiens | ENCSR372GIN | 12,750 | |||
| CBX5 | K-562 | ENCODE | Homo sapiens | ENCSR272JAT | 9,504 | |||
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |