BRG1
Information BRG1
- Description
The protein encoded by this gene is a member of the SWI/SNF family of proteins and is similar to the brahma protein of Drosophila. Members of this family have helicase and ATPase activities and are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein is part of the large ATP-dependent chromatin remodeling complex SNF/SWI, which is required for transcriptional activation of genes normally repressed by chromatin. In addition, this protein can bind BRCA1, as well as regulate the expression of the tumorigenic protein CD44. Mutations in this gene cause rhabdoid tumor predisposition syndrome type 2. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2012]
- Full Name
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
- Source NCBI
ReMap Statistics
- Datasets
- 24
- Biotypes
- 15
- Peaks
- 72,309
- Non-redundant peaks
- 71,735
TF Classification
- Super Class
- Unknown
- Class
- Unknown
- Familly
- Unknown
- Sub Familly
- Unknown
Source TFClass
External IDs
- JASPAR
- Ensembl
- ENSG00000127616
- UniProt
- P51532
- Genevisible
- P51532
- RefSeq
- NM_001128844
- Aliases
- BAF190; BAF190A; BRG1; CSS4; FLJ39786; MRD16; RTPS2; SNF2; SNF2-BETA; SNF2L4; SNF2LB; SWI2; hSNF2b
Datasets Table for BRG1
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
SMARCA4 | WA09 | GEO | Homo sapiens | GSE105028 | 1,792 | |||
SMARCA4 | Aska-SS | GEO | Homo sapiens | GSE108025 | 35,450 | |||
SMARCA4 | Aska-SS | shSSX | GEO | Homo sapiens | GSE108025 | 47,237 | ||
SMARCA4 | K-562 | ENCODE | Homo sapiens | ENCSR587OQL | 74,342 | |||
SMARCA4 | K-562 | ENCODE | Homo sapiens | ENCSR643VTW | 61,980 | |||
SMARCA4 | SYO-1 | GEO | Homo sapiens | GSE108025 | 16,971 | |||
SMARCA4 | HeLa-S3 | ENCODE | Homo sapiens | ENCSR000EZC | 5,175 | |||
SMARCA4 | neuron | bipolar_doxy_4d | ENCODE | Homo sapiens | ENCSR839SFJ | 109,209 | ||
SMARCA4 | J-Lat | GFP-Clone-A72_DMSO | GEO | Homo sapiens | GSE100266 | 23,208 | ||
SMARCA4 | J-Lat | GFP-Clone-A72_JQ1 | GEO | Homo sapiens | GSE100266 | 9,373 | ||
SMARCA4 | 501MEL | SHCTR | GEO | Homo sapiens | GSE61965 | 50,412 | ||
SMARCA4 | 501MEL | SHMITF | GEO | Homo sapiens | GSE61965 | 25,635 | ||
SMARCA4 | 501MEL | SHSOX10 | GEO | Homo sapiens | GSE61965 | 40,267 | ||
SMARCA4 | BT-16 | Dox | GEO | Homo sapiens | GSE71504 | 18,444 | ||
SMARCA4 | BT-16 | NoDox | GEO | Homo sapiens | GSE71504 | 1,430 | ||
SMARCA4 | G-401 | Dox | GEO | Homo sapiens | GSE71504 | 918 | ||
SMARCA4 | G-401 | NoDox | GEO | Homo sapiens | GSE71504 | 509 | ||
SMARCA4 | MCF-10A | GEO | Homo sapiens | GSE74716 | 27,092 | |||
SMARCA4 | LNCaP | r1881 | GEO | Homo sapiens | GSE94682 | 11,962 | ||
SMARCA4 | TTC-549 | Dox | GEO | Homo sapiens | GSE71504 | 6,701 | ||
SMARCA4 | TTC-549 | NoDox | GEO | Homo sapiens | GSE71504 | 6,134 | ||
SMARCA4 | HCT-116 | GEO | Homo sapiens | GSE71510 | 1,883 | |||
SMARCA4 | WA09 | heat-shock | GEO | Homo sapiens | GSE105028 | 3,058 | ||
SMARCA4 | HS-SY-2 | HA-tagged | GEO | Homo sapiens | GSE108926 | 57,289 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |