BRD2

Information BRD2

Description

This gene encodes a transcriptional regulator that belongs to the BET (bromodomains and extra terminal domain) family of proteins. This protein associates with transcription complexes and with acetylated chromatin during mitosis, and it selectively binds to the acetylated lysine-12 residue of histone H4 via its two bromodomains. The gene maps to the major histocompatability complex (MHC) class II region on chromosome 6p21.3, but sequence comparison suggests that the protein is not involved in the immune response. This gene has been implicated in juvenile myoclonic epilepsy, a common form of epilepsy that becomes apparent in adolescence. Multiple alternatively spliced variants have been described for this gene. [provided by RefSeq, Dec 2010]

Full Name

bromodomain containing 2

Source NCBI

ReMap Statistics

Datasets
9
Biotypes
6
Peaks
322,189
Non-redundant peaks
207,164

TF Classification

Super Class
Unknown
Class
Unknown
Familly
Unknown
Sub Familly
Unknown

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000236227
UniProt
P25440
Genevisible
P25440
RefSeq
NM_001113182
Aliases
BRD2-IT1; D6S113E; FSH; FSRG1; KIAA9001; NAT; O27.1.1; RING3; RNF3
All peaks BRD2
Download BED file
Non redundant peaks BRD2
Download BED file
SEQUENCES BRD2
Download FASTA file
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Datasets Table for BRD2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
BRD2 NCI-H23 GEO Homo sapiens GSE104481 16,130
BRD2 HEK293T GEO Homo sapiens GSE39579 105,921
BRD2 HUVEC-C GEO Homo sapiens GSE60171 10,803
BRD2 HUVEC-C MS417 GEO Homo sapiens GSE60171 332
BRD2 NCI-H23 GEO Homo sapiens GSE113714 18,922
BRD2 SK-MEL-147 GEO Homo sapiens GSE94488 84,477
BRD2 SK-MEL-147 JQ1 GEO Homo sapiens GSE94488 63,783
BRD2 MM1-S GEO Homo sapiens GSE43743 6,246
BRD2 foreskin NHM1-5 GEO Homo sapiens GSE94488 15,575
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.