C24_seedling

Information for C24_seedling

Description

The embryonic product of the germination of a seed. The young shoot and root axis.

Source BRENDA Tissue Ontology (BTO)

ReMap Statistics

Datasets
12
Transcriptional Factors
4
Peaks
146,427
Non-redundant peaks
57,981

Description

Biotype name
C24_seedling
Ecotype
C24

External IDs

Araport
seedling
AraPheno
seedling
Experimental Factor
seedling
BRENDA Tissue
seedling
Wiki
C24_seedling
All peaks C24_seedling
Download BED file
Non redundant C24_seedling
Download BED file
Non redundant seedling
Download BED file
CRMs seedling
Download BED file

Datasets Table for seedling

Biotype Biotype modification Ecotype Target name Target modification Source Species Experiment Peaks
C24_seedling 2w C24 APRR1 GEO Arabidopsis thaliana GSE35952 Download (487)
C24_seedling 10d-wt C24 H3K4me3 GEO Arabidopsis thaliana GSE79738 Download (16,881)
C24_seedling 10d-wt C24 H3K27me3 GEO Arabidopsis thaliana GSE79738 Download (14,404)
C24_seedling 10d-fen1 C24 H3K4me3 GEO Arabidopsis thaliana GSE79738 Download (17,002)
C24_seedling 10d-fen1 C24 H3K27me3 GEO Arabidopsis thaliana GSE79738 Download (16,031)
C24_seedling 10d-wt C24 H3K9me2 GEO Arabidopsis thaliana GSE79259 Download (6,654)
C24_seedling 10d-pold2 C24 H3K9me2 GEO Arabidopsis thaliana GSE79259 Download (6,870)
C24_seedling 10d-wt C24 H3K4me3 GEO Arabidopsis thaliana GSE79259 Download (16,815)
C24_seedling 10d-pold2 C24 H3K4me3 GEO Arabidopsis thaliana GSE79259 Download (17,314)
C24_seedling 14d-wt C24 H3K27me3 GEO Arabidopsis thaliana GSE62615 Download (10,255)
C24_seedling 10d-pold2 C24 H3K27me3 GEO Arabidopsis thaliana GSE79259 Download (16,216)
C24_seedling 14d-clf C24 H3K27me3 GEO Arabidopsis thaliana GSE62615 Download (7,985)
Biotype Biotype modification Ecotype Target name Target modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.