ZNF197

Information ZNF197

Description

This gene product belongs to the zinc finger protein superfamily, members of which are regulatory proteins characterized by nucleic acid-binding zinc finger domains. The encoded protein contains 20 tandemly arrayed C2H2-type zinc fingers, a Kruppel-associated box (KRAB) domain, and a SCAN box. This transcript turns over rapidly and contains 3' UTR AUUUA motifs, which are often a hallmark of rapid turnover. It is overexpressed in some thyroid papillary carcinomas. This gene is located in a cluster of zinc finger genes at 3p21. Naturally-occurring readthrough transcription is observed between this gene and the upstream zinc finger protein 660 gene and is represented by GeneID:110354863. [provided by RefSeq, May 2017]

Full Name

zinc finger protein 197

Source NCBI

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
1,174
Non-redundant peaks
1,172

TF Classification

Super Class
Zinc-coordinating DNA-binding domains
Class
C2H2 zinc finger factors
Familly
More than 3 adjacent zinc finger factors
Sub Familly
unclassified

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000281709
UniProt
O14709
Genevisible
O14709
RefSeq
NM_001024855
Aliases
D3S1363E; P18; VHLaK; ZKSCAN9; ZNF166; ZNF20; ZSCAN41
All peaks ZNF197
Download BED file
Non redundant peaks ZNF197
Download BED file
SEQUENCES ZNF197
Download FASTA file
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Datasets Table for ZNF197

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
ZNF197 K-562 ENCODE Homo sapiens ENCSR580IAO 759
ZNF197 HEK293T GEO Homo sapiens GSE78099 415
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.