ZIC2

Information ZIC2

Description

This gene encodes a member of the ZIC family of C2H2-type zinc finger proteins. This protein functions as a transcriptional repressor and may regulate tissue specific expression of dopamine receptor D1. Expansion of an alanine repeat in the C-terminus of the encoded protein and other mutations in this gene cause holoprosencephaly type 5. Holoprosencephaly is the most common structural anomaly of the human brain. A polyhistidine tract polymorphism in this gene may be associated with increased risk of neural tube defects. This gene is closely linked to a gene encoding zinc finger protein of the cerebellum 5, a related family member on chromosome 13. [provided by RefSeq, Jul 2016]

Full Name

Zic family member 2

Source NCBI

ReMap Statistics

Datasets
3
Biotypes
2
Peaks
89,521
Non-redundant peaks
88,376

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000043355
UniProt
O95409
Genevisible
O95409
RefSeq
NM_007129
Aliases
HPE5
All peaks ZIC2
Download BED file
Non redundant peaks ZIC2
Download BED file
SEQUENCES ZIC2
Download FASTA file
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Datasets Table for ZIC2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
ZIC2 HEK293 ENCODE Homo sapiens ENCSR728MWW 87,817
ZIC2 BCBL-1 latent GEO Homo sapiens GSE102462 1,353
ZIC2 BCBL-1 lytic GEO Homo sapiens GSE102462 351
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.