SREBF1

Information SREBF1

Description

This gene encodes a basic helix-loop-helix-leucine zipper (bHLH-Zip) transcription factor that binds to the sterol regulatory element-1 (SRE1), which is a motif that is found in the promoter of the low density lipoprotein receptor gene and other genes involved in sterol biosynthesis. The encoded protein is synthesized as a precursor that is initially attached to the nuclear membrane and endoplasmic reticulum. Following cleavage, the mature protein translocates to the nucleus and activates transcription. This cleaveage is inhibited by sterols. This gene is located within the Smith-Magenis syndrome region on chromosome 17. Alternative promoter usage and splicing result in multiple transcript variants, including SREBP-1a and SREBP-1c, which correspond to RefSeq transcript variants 2 and 3, respectively. [provided by RefSeq, Nov 2017]

Full Name

sterol regulatory element binding transcription factor 1

Source NCBI

ReMap Statistics

Datasets
6
Biotypes
5
Peaks
25,666
Non-redundant peaks
20,645

TF Classification

Super Class
Basic domains
Class
Basic helix-loop-helix factors (bHLH)
Familly
bHLH-ZIP factors
Sub Familly
SREBP factors

Source TFClass

External IDs

JASPAR
MA0595
Ensembl
ENSG00000072310
UniProt
P36956
Genevisible
P36956
RefSeq
NM_001005291
Aliases
SREBP-1c; SREBP1; SREBP1a; bHLHd1
All peaks SREBF1
Download BED file
Non redundant peaks SREBF1
Download BED file
SEQUENCES SREBF1
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for SREBF1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SREBF1 GM12878 ENCODE Homo sapiens ENCSR000DYU 1,516
SREBF1 A-549 ENCODE Homo sapiens ENCSR897MYK 4,004
SREBF1 Hep-G2 ENCODE Homo sapiens ENCSR000EEO 1,467
SREBF1 Hep-G2 ENCODE Homo sapiens ENCSR000EZP 273
SREBF1 K-562 ENCODE Homo sapiens ENCSR815ZDS 12,832
SREBF1 MCF-7 ENCODE Homo sapiens ENCSR197DJH 5,574
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.