SPL1

Information SPL1

Description

member of SPL gene family, encodes DNA binding proteins and putative transcription factors. All have the SBP-box, which encodes the SBP-domain, required for and sufficient for interaction with DNA.

Full Name

squamosa promoter binding protein-like 1

Source NCBI

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
9,118
Non-redundant peaks
6,309

TF Classification

Familly
SBP
Sub Familly
putative squamosa-promoter binding protein

Source AtTFDB

External IDs

JASPAR
MA1055
Ensembl
AT2G47070
UniProt
Q9SMX9
Genevisible
Q9SMX9
RefSeq
NM_180137.3
Aliases
All peaks SPL1
Download BED file
Non redundant peaks SPL1
Download BED file
SEQUENCES SPL1
Download FASTA file
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Datasets Table for SPL1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SPL1 Col-0 Col-0_leaves tnt_col GEO Arabidopsis thaliana GSE60141 3,007
SPL1 Col-0 Col-0_leaves tnt_colamp GEO Arabidopsis thaliana GSE60141 6,111
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.