SPIB

Information SPIB

Description

The protein encoded by this gene is a transcriptional activator that binds to the PU-box (5'-GAGGAA-3') and acts as a lymphoid-specific enhancer. Four transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2011]

Full Name

Spi-B transcription factor

Source NCBI

ReMap Statistics

Datasets
4
Biotypes
2
Peaks
77,761
Non-redundant peaks
48,908

TF Classification

Super Class
Helix-turn-helix domains
Class
Tryptophan cluster factors
Familly
Ets-related factors
Sub Familly
Spi-like factors

Source TFClass

External IDs

JASPAR
MA0081
Ensembl
ENSG00000269404
UniProt
Q01892
Genevisible
Q01892
RefSeq
NM_001243998
Aliases
SPI-B
All peaks SPIB
Download BED file
Non redundant peaks SPIB
Download BED file
SEQUENCES SPIB
Download FASTA file
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Datasets Table for SPIB

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SPIB OCI-Ly10 GEO Homo sapiens GSE56857 18,095
SPIB OCI-Ly3 GEO Homo sapiens GSE56857 28,001
SPIB OCI-Ly3 SHCTR GEO Homo sapiens GSE56857 28,168
SPIB OCI-Ly3 SHSPIB GEO Homo sapiens GSE56857 3,497
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.