SPCH

Information SPCH

Description

Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6. Its transcript levels change after inducing MUTE expression in a mute background.

Full Name

basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Source NCBI

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
21,502
Non-redundant peaks
21,502

TF Classification

Familly
bHLH
Sub Familly
bHLH protein

Source AtTFDB

External IDs

JASPAR
Ensembl
AT5G53210
UniProt
Q700C7
Genevisible
Q700C7
RefSeq
NM_124700.3
Aliases

External links
All peaks SPCH
Download BED file
Non redundant peaks SPCH
Download BED file
SEQUENCES SPCH
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for SPCH

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SPCH Col Col_seedling 4d GEO Arabidopsis thaliana GSE57497 21,502
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.