SOX4

Information SOX4

Description

This intronless gene encodes a member of the SOX (SRY-related HMG-box) family of transcription factors involved in the regulation of embryonic development and in the determination of the cell fate. The encoded protein may act as a transcriptional regulator after forming a protein complex with other proteins, such as syndecan binding protein (syntenin). The protein may function in the apoptosis pathway leading to cell death as well as to tumorigenesis and may mediate downstream effects of parathyroid hormone (PTH) and PTH-related protein (PTHrP) in bone development. The solution structure has been resolved for the HMG-box of a similar mouse protein. [provided by RefSeq, Jul 2008]

Full Name

SRY-box transcription factor 4

Source NCBI

ReMap Statistics

Datasets
9
Biotypes
4
Peaks
67,533
Non-redundant peaks
49,278

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

JASPAR
MA0867
Ensembl
ENSG00000124766
UniProt
Q06945
Genevisible
Q06945
RefSeq
NM_003107
Aliases
EVI16
All peaks SOX4
Download BED file
Non redundant peaks SOX4
Download BED file
SEQUENCES SOX4
Download FASTA file
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Datasets Table for SOX4

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SOX4 HCC1954 GEO Homo sapiens GSE104760 7,814
SOX4 HCC1954 TGFb GEO Homo sapiens GSE104760 3,565
SOX4 MDA-MB-231 GEO Homo sapiens GSE104760 19,732
SOX4 MDA-MB-231 TGFb GEO Homo sapiens GSE104760 15,057
SOX4 HMLE GEO Homo sapiens GSE104760 180
SOX4 HMLE Doxycicline GEO Homo sapiens GSE104760 251
SOX4 HMLE Doxycicline_TGFb GEO Homo sapiens GSE104760 682
SOX4 HMLE TGFb GEO Homo sapiens GSE104760 570
SOX4 MRC-5 1DPT GEO Homo sapiens GSE75910 19,682
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.