SOC1

Information SOC1

Description

Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.

Full Name

AGAMOUS-like 20

Source NCBI

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
1,537
Non-redundant peaks
1,537

TF Classification

Familly
MADS
Sub Familly
MADS-box protein (AGL20)

Source AtTFDB

External IDs

JASPAR
MA0554
Ensembl
AT2G45660
UniProt
O64645
Genevisible
O64645
RefSeq
NM_130128.4
Aliases
All peaks SOC1
Download BED file
Non redundant peaks SOC1
Download BED file
SEQUENCES SOC1
Download FASTA file
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Datasets Table for SOC1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SOC1 Col-0 Col-0_whole-plant 18d GEO Arabidopsis thaliana GSE45846 1,537
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.