SMARCC2

Information SMARCC2

Description

The protein encoded by this gene is a member of the SWI/SNF family of proteins, whose members display helicase and ATPase activities and which are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein is part of the large ATP-dependent chromatin remodeling complex SNF/SWI and contains a predicted leucine zipper motif typical of many transcription factors. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Full Name

SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2

Source NCBI

ReMap Statistics

Datasets
3
Biotypes
3
Peaks
25,167
Non-redundant peaks
24,056

TF Classification

Super Class
Helix-turn-helix domains
Class
Tryptophan cluster factors
Familly
Myb/SANT domain factors
Sub Familly
TADA2-like factors

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000139613
UniProt
Q8TAQ2
Genevisible
Q8TAQ2
RefSeq
NM_001130420
Aliases
BAF170; CRACC2; CSS8; Rsc8
All peaks SMARCC2
Download BED file
Non redundant peaks SMARCC2
Download BED file
SEQUENCES SMARCC2
Download FASTA file
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Datasets Table for SMARCC2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SMARCC2 Hep-G2 ENCODE Homo sapiens ENCSR887LYD 3,057
SMARCC2 K-562 ENCODE Homo sapiens ENCSR519WMW 16,165
SMARCC2 HeLa-S3 ENCODE Homo sapiens ENCSR000EDL 5,945
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.