SMARCC1
Information SMARCC1
- Description
The protein encoded by this gene is a member of the SWI/SNF family of proteins, whose members display helicase and ATPase activities and which are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein is part of the large ATP-dependent chromatin remodeling complex SNF/SWI and contains a predicted leucine zipper motif typical of many transcription factors. [provided by RefSeq, Jul 2008]
- Full Name
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
- Source NCBI
ReMap Statistics
- Datasets
- 21
- Biotypes
- 12
- Peaks
- 354,956
- Non-redundant peaks
- 227,889
TF Classification
- Super Class
- Helix-turn-helix domains
- Class
- Tryptophan cluster factors
- Familly
- Myb/SANT domain factors
- Sub Familly
- TADA2-like factors
Source TFClass
External IDs
- JASPAR
- Ensembl
- ENSG00000173473
- UniProt
- Q92922
- Genevisible
- Q92922
- RefSeq
- NM_003074
- Aliases
- BAF155; CRACC1; Rsc8; SRG3; SWI3
Datasets Table for SMARCC1
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
|---|---|---|---|---|---|---|---|---|
| SMARCC1 | Aska-SS | GEO | Homo sapiens | GSE108025 | 54,976 | |||
| SMARCC1 | Aska-SS | shSSX | GEO | Homo sapiens | GSE108025 | 53,016 | ||
| SMARCC1 | Hep-G2 | GEO | Homo sapiens | GSE108514 | 25,868 | |||
| SMARCC1 | HS-SY-2 | GEO | Homo sapiens | GSE108025 | 51,135 | |||
| SMARCC1 | SYO-1 | GEO | Homo sapiens | GSE108025 | 7,829 | |||
| SMARCC1 | HeLa-S3 | ENCODE | Homo sapiens | ENCSR000EDM | 29,862 | |||
| SMARCC1 | BT-16 | Dox | GEO | Homo sapiens | GSE71504 | 4,414 | ||
| SMARCC1 | G-401 | Dox | GEO | Homo sapiens | GSE71504 | 4,535 | ||
| SMARCC1 | G-401 | NoDox | GEO | Homo sapiens | GSE71504 | 1,804 | ||
| SMARCC1 | LNCaP | ERG | GEO | Homo sapiens | GSE110655 | 113,997 | ||
| SMARCC1 | LNCaP | GEO | Homo sapiens | GSE110655 | 99,727 | |||
| SMARCC1 | SK-N-MC | GEO | Homo sapiens | GSE94275 | 38,119 | |||
| SMARCC1 | SK-N-MC | shEWSFLI1 | GEO | Homo sapiens | GSE94275 | 18,141 | ||
| SMARCC1 | SK-N-MC | shGFP | GEO | Homo sapiens | GSE94275 | 17,358 | ||
| SMARCC1 | TTC-549 | Dox | GEO | Homo sapiens | GSE71504 | 24,952 | ||
| SMARCC1 | TTC-549 | NoDox | GEO | Homo sapiens | GSE71504 | 20,600 | ||
| SMARCC1 | HCT-116 | GEO | Homo sapiens | GSE71510 | 2,347 | |||
| SMARCC1 | LNCaP | ERG-R367K | GEO | Homo sapiens | GSE110655 | 105,914 | ||
| SMARCC1 | VCaP | shARID1A | GEO | Homo sapiens | GSE110655 | 71,543 | ||
| SMARCC1 | VCaP | shCt | GEO | Homo sapiens | GSE110655 | 94,888 | ||
| SMARCC1 | VCaP | shERG | GEO | Homo sapiens | GSE110655 | 77,256 | ||
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |