SMAD4

Information SMAD4

Description

This gene encodes a member of the Smad family of signal transduction proteins. Smad proteins are phosphorylated and activated by transmembrane serine-threonine receptor kinases in response to transforming growth factor (TGF)-beta signaling. The product of this gene forms homomeric complexes and heteromeric complexes with other activated Smad proteins, which then accumulate in the nucleus and regulate the transcription of target genes. This protein binds to DNA and recognizes an 8-bp palindromic sequence (GTCTAGAC) called the Smad-binding element (SBE). The protein acts as a tumor suppressor and inhibits epithelial cell proliferation. It may also have an inhibitory effect on tumors by reducing angiogenesis and increasng blood vessel hyperpermeability. The encoded protein is a crucial component of the bone morphogenetic protein signaling pathway. The Smad proteins are subject to complex regulation by post-translational modifications. Mutations or deletions in this gene have been shown to result in pancreatic cancer, juvenile polyposis syndrome, and hereditary hemorrhagic telangiectasia syndrome. [provided by RefSeq, Aug 2017]

Full Name

SMAD family member 4

Source NCBI

ReMap Statistics

Datasets
6
Biotypes
3
Peaks
152,595
Non-redundant peaks
135,475

TF Classification

Super Class
beta-Hairpin exposed by an alpha/beta-scaffold
Class
SMAD/NF-1 DNA-binding domain factors
Familly
SMAD factors
Sub Familly
Co-activating Smads (Co-Smad)

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000141646
UniProt
Q13485
Genevisible
Q13485
RefSeq
NM_005359
Aliases
DPC4; JIP; MADH4; MYHRS
All peaks SMAD4
Download BED file
Non redundant peaks SMAD4
Download BED file
SEQUENCES SMAD4
Download FASTA file
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Datasets Table for SMAD4

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SMAD4 Hep-G2 ENCODE Homo sapiens ENCSR826YMT 123,370
SMAD4 endoderm GEO Homo sapiens GSE29422 7,575
SMAD4 hESC GEO Homo sapiens GSE29422 3,413
SMAD4 Hep-G2 Ab_13-2-1A5 GEO Homo sapiens GSE97661 1,978
SMAD4 Hep-G2 Ab_R516-1-1G12 GEO Homo sapiens GSE97661 11,483
SMAD4 Hep-G2 Ab_R516 GEO Homo sapiens GSE97661 4,776
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

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AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.