SEP3

Information SEP3

Description

Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.

Full Name

K-box region and MADS-box transcription factor family protein

Source NCBI

ReMap Statistics

Datasets
5
Biotypes
2
Peaks
36,008
Non-redundant peaks
16,174

TF Classification

Familly
MADS
Sub Familly
MADS-box protein

Source AtTFDB

External IDs

JASPAR
MA0563
Ensembl
AT1G24260
UniProt
O22456
Genevisible
O22456
RefSeq
NM_180622.3
Aliases
All peaks SEP3
Download BED file
Non redundant peaks SEP3
Download BED file
SEQUENCES SEP3
Download FASTA file
DOWNLOAD All ReMap
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Datasets Table for SEP3

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SEP3 Col-0 Col-0_inflorescence 5-7w GEO Arabidopsis thaliana GSE14600 6,099
SEP3 Ler Ler_inflorescence 5-7w GEO Arabidopsis thaliana GSE14600 5,862
SEP3 Ler Ler_inflorescence 4w-2d GEO Arabidopsis thaliana GSE46986 4,306
SEP3 Ler Ler_inflorescence 4w-4d GEO Arabidopsis thaliana GSE46986 9,530
SEP3 Ler Ler_inflorescence 4w-8d GEO Arabidopsis thaliana GSE46986 10,211
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.