RXRA

Information RXRA

Description

Retinoid X receptors (RXRs) and retinoic acid receptors (RARs) are nuclear receptors that mediate the biological effects of retinoids by their involvement in retinoic acid-mediated gene activation. These receptors function as transcription factors by binding as homodimers or heterodimers to specific sequences in the promoters of target genes. The protein encoded by this gene is a member of the steroid and thyroid hormone receptor superfamily of transcriptional regulators. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2014]

Full Name

retinoid X receptor alpha

Source NCBI

ReMap Statistics

Datasets
8
Biotypes
6
Peaks
293,813
Non-redundant peaks
168,027

TF Classification

Super Class
Zinc-coordinating DNA-binding domains
Class
Nuclear receptors with C4 zinc fingers
Familly
RXR-related receptors (NR2)
Sub Familly
Retinoid X receptors (NR2B)

Source TFClass

External IDs

JASPAR
MA1146
Ensembl
ENSG00000186350
UniProt
P19793
Genevisible
P19793
RefSeq
NM_001291920
Aliases
NR2B1
All peaks RXRA
Download BED file
Non redundant peaks RXRA
Download BED file
SEQUENCES RXRA
Download FASTA file
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Datasets Table for RXRA

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
RXRA GM12878 ENCODE Homo sapiens ENCSR000BJD 15,366
RXRA liver ENCODE Homo sapiens ENCSR098XMN 102,767
RXRA liver ENCODE Homo sapiens ENCSR352QSB 92,826
RXRA Hep-G2 ENCODE Homo sapiens ENCSR000BHU 29,254
RXRA JMSU-1 GEO Homo sapiens GSE107734 15,403
RXRA JMSU-1 RXRA-S427F GEO Homo sapiens GSE107734 15,452
RXRA SK-N-SH ENCODE Homo sapiens ENCSR000BVG 17,980
RXRA WA01 ENCODE Homo sapiens ENCSR000BJW 4,765
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.