PCBP1

Information PCBP1

Description

This intronless gene is thought to have been generated by retrotransposition of a fully processed PCBP-2 mRNA. This gene and PCBP-2 have paralogues (PCBP3 and PCBP4) which are thought to have arisen as a result of duplication events of entire genes. The protein encoded by this gene appears to be multifunctional. It along with PCBP-2 and hnRNPK corresponds to the major cellular poly(rC)-binding protein. It contains three K-homologous (KH) domains which may be involved in RNA binding. This encoded protein together with PCBP-2 also functions as translational coactivators of poliovirus RNA via a sequence-specific interaction with stem-loop IV of the IRES and promote poliovirus RNA replication by binding to its 5'-terminal cloverleaf structure. It has also been implicated in translational control of the 15-lipoxygenase mRNA, human Papillomavirus type 16 L2 mRNA, and hepatitis A virus RNA. The encoded protein is also suggested to play a part in formation of a sequence-specific alpha-globin mRNP complex which is associated with alpha-globin mRNA stability. [provided by RefSeq, Jul 2008]

Full Name

poly(rC) binding protein 1

Source NCBI

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
51,048
Non-redundant peaks
42,187

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000169564
UniProt
Q15365
Genevisible
Q15365
RefSeq
NM_006196
Aliases
HEL-S-85; HNRPE1; HNRPX; hnRNP-E1; hnRNP-X
All peaks PCBP1
Download BED file
Non redundant peaks PCBP1
Download BED file
SEQUENCES PCBP1
Download FASTA file
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Datasets Table for PCBP1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
PCBP1 Hep-G2 ENCODE Homo sapiens ENCSR872EVQ 31,610
PCBP1 K-562 ENCODE Homo sapiens ENCSR052PTN 19,438
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.