NKX2-1

Information NKX2-1

Description

This gene encodes a protein initially identified as a thyroid-specific transcription factor. The encoded protein binds to the thyroglobulin promoter and regulates the expression of thyroid-specific genes but has also been shown to regulate the expression of genes involved in morphogenesis. Mutations and deletions in this gene are associated with benign hereditary chorea, choreoathetosis, congenital hypothyroidism, and neonatal respiratory distress, and may be associated with thyroid cancer. Multiple transcript variants encoding different isoforms have been found for this gene. This gene shares the symbol/alias 'TTF1' with another gene, transcription termination factor 1, which plays a role in ribosomal gene transcription. [provided by RefSeq, Feb 2014]

Full Name

NK2 homeobox 1

Source NCBI

ReMap Statistics

Datasets
5
Biotypes
5
Peaks
271,079
Non-redundant peaks
218,070

TF Classification

Super Class
Helix-turn-helix domains
Class
Homeo domain factors
Familly
NK-related factors
Sub Familly
NK-2.1

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000136352
UniProt
P43699
Genevisible
P43699
RefSeq
NM_001079668
Aliases
BCH; BHC; NK-2; NKX2.1; NKX2A; NMTC1; T/EBP; TEBP; TITF1; TTF-1; TTF1
All peaks NKX2-1
Download BED file
Non redundant peaks NKX2-1
Download BED file
SEQUENCES NKX2-1
Download FASTA file
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Datasets Table for NKX2-1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
NKX2-1 A-549 GEO Homo sapiens GSE86957 131,266
NKX2-1 NCI-H1819 GEO Homo sapiens GSE39998 11,238
NKX2-1 NCI-H2087 GEO Homo sapiens GSE39998 13,635
NKX2-1 NCI-H3122 GEO Homo sapiens GSE39998 61,521
NKX2-1 H9 derived-cIN GEO Homo sapiens GSE99937 53,419
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.