HMGB1

Information HMGB1

Description

This gene encodes a protein that belongs to the High Mobility Group-box superfamily. The encoded non-histone, nuclear DNA-binding protein regulates transcription, and is involved in organization of DNA. This protein plays a role in several cellular processes, including inflammation, cell differentiation and tumor cell migration. Multiple pseudogenes of this gene have been identified. Alternative splicing results in multiple transcript variants that encode the same protein. [provided by RefSeq, Sep 2015]

Full Name

high mobility group box 1

Source NCBI

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
8,518
Non-redundant peaks
8,518

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000189403
UniProt
P09429
Genevisible
P09429
RefSeq
NM_001313892
Aliases
DKFZp686A04236; HMG-1; HMG1; HMG3; SBP-1
All peaks HMGB1
Download BED file
Non redundant peaks HMGB1
Download BED file
SEQUENCES HMGB1
Download FASTA file
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Datasets Table for HMGB1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
HMGB1 HUVEC-C GEO Homo sapiens GSE98245 7,134
HMGB1 IMR-90 GEO Homo sapiens GSE98245 1,384
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.