GFI1

Information GFI1

Description

This gene encodes a nuclear zinc finger protein that functions as a transcriptional repressor. This protein plays a role in diverse developmental contexts, including hematopoiesis and oncogenesis. It functions as part of a complex along with other cofactors to control histone modifications that lead to silencing of the target gene promoters. Mutations in this gene cause autosomal dominant severe congenital neutropenia, and also dominant nonimmune chronic idiopathic neutropenia of adults, which are heterogeneous hematopoietic disorders that cause predispositions to leukemias and infections. Multiple alternatively spliced variants, encoding the same protein, have been identified for this gene. [provided by RefSeq, Jul 2008]

Full Name

growth factor independent 1 transcriptional repressor

Source NCBI

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
6,329
Non-redundant peaks
5,793

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000162676
UniProt
Q99684
Genevisible
Q99684
RefSeq
NM_001127215
Aliases
GFI-1; GFI1A; SCN2; ZNF163
All peaks GFI1
Download BED file
Non redundant peaks GFI1
Download BED file
SEQUENCES GFI1
Download FASTA file
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Datasets Table for GFI1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
GFI1 THP-1 GEO Homo sapiens GSE90769 5,677
GFI1 THP-1 OG86 GEO Homo sapiens GSE90769 652
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.