GABPA

Information GABPA

Description

This gene encodes one of three GA-binding protein transcription factor subunits which functions as a DNA-binding subunit. Since this subunit shares identity with a subunit encoding the nuclear respiratory factor 2 gene, it is likely involved in activation of cytochrome oxidase expression and nuclear control of mitochondrial function. This subunit also shares identity with a subunit constituting the transcription factor E4TF1, responsible for expression of the adenovirus E4 gene. Because of its chromosomal localization and ability to form heterodimers with other polypeptides, this gene may play a role in the Down Syndrome phenotype. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Oct 2010]

Full Name

GA binding protein transcription factor subunit alpha

Source NCBI

ReMap Statistics

Datasets
25
Biotypes
16
Peaks
504,159
Non-redundant peaks
264,932

TF Classification

Super Class
Helix-turn-helix domains
Class
Tryptophan cluster factors
Familly
Ets-related factors
Sub Familly
Ets-like factors

Source TFClass

External IDs

JASPAR
MA0062
Ensembl
ENSG00000154727
UniProt
Q06546
Genevisible
Q06546
RefSeq
NM_001197297
Aliases
E4TF1-60; E4TF1A; NFT2; NRF2; NRF2A; RCH04A07
All peaks GABPA
Download BED file
Non redundant peaks GABPA
Download BED file
SEQUENCES GABPA
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for GABPA

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
GABPA GM12878 ENCODE Homo sapiens ENCSR000BGC 4,565
GABPA GM12878 ENCODE Homo sapiens ENCSR331HPA 12,636
GABPA liver ENCODE Homo sapiens ENCSR038GMB 21,605
GABPA liver ENCODE Homo sapiens ENCSR350ORK 6,916
GABPA A-549 ENCODE Homo sapiens ENCSR000BPY 20,130
GABPA Hep-G2 ENCODE Homo sapiens ENCSR000BJK 8,878
GABPA Hep-G2 ENCODE Homo sapiens ENCSR269TNX 16,192
GABPA HL-60 ENCODE Homo sapiens ENCSR000BTK 8,471
GABPA K-562 ENCODE Homo sapiens ENCSR000BLO 34,798
GABPA K-562 ENCODE Homo sapiens ENCSR290MUH 17,120
GABPA MCF-7 ENCODE Homo sapiens ENCSR000BUK 17,444
GABPA SK-N-SH ENCODE Homo sapiens ENCSR000BTG 11,732
GABPA WA01 ENCODE Homo sapiens ENCSR000BIW 31,219
GABPA HeLa-S3 ENCODE Homo sapiens ENCSR000BHS 9,892
GABPA DU145 GEO Homo sapiens GSE59021 3,116
GABPA HeLa GEO Homo sapiens GSE31417 2,957
GABPA Jurkat GEO Homo sapiens GSE49091 85,942
GABPA VCaP GEO Homo sapiens GSE49091 54,951
GABPA VCaP ETOH GEO Homo sapiens GSE49091 52,957
GABPA VCaP R1881 GEO Homo sapiens GSE49091 56,726
GABPA Hep-G2 GEO Homo sapiens GSE72082 16,631
GABPA MCF-7 GEO Homo sapiens GSE72082 4,411
GABPA RWPE-1 GEO Homo sapiens GSE29808 2,684
GABPA THP-1 calcitriol_100nM_1d GEO Homo sapiens GSE98093 955
GABPA THP-1 EtOH_1d GEO Homo sapiens GSE98093 1,231
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.