FOXA2

Information FOXA2

Description

This gene encodes a member of the forkhead class of DNA-binding proteins. These hepatocyte nuclear factors are transcriptional activators for liver-specific genes such as albumin and transthyretin, and they also interact with chromatin. Similar family members in mice have roles in the regulation of metabolism and in the differentiation of the pancreas and liver. This gene has been linked to sporadic cases of maturity-onset diabetes of the young. Transcript variants encoding different isoforms have been identified for this gene. [provided by RefSeq, Oct 2008]

Full Name

forkhead box A2

Source NCBI

ReMap Statistics

Datasets
26
Biotypes
9
Peaks
1,358,678
Non-redundant peaks
591,601

TF Classification

Super Class
Helix-turn-helix domains
Class
Fork head / winged helix factors
Familly
Forkhead box (FOX) factors
Sub Familly
FOXA

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000125798
UniProt
Q9Y261
Genevisible
Q9Y261
RefSeq
NM_021784
Aliases
HNF3B; TCF3B
All peaks FOXA2
Download BED file
Non redundant peaks FOXA2
Download BED file
SEQUENCES FOXA2
Download FASTA file
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Datasets Table for FOXA2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
FOXA2 islet ENA Homo sapiens ERP004003 163,078
FOXA2 liver ENCODE Homo sapiens ENCSR080XEY 36,095
FOXA2 liver ENCODE Homo sapiens ENCSR310NYI 29,752
FOXA2 liver CARN1618 ENA Homo sapiens ERP008682 35,908
FOXA2 pancreas CARN1618 ENA Homo sapiens ERP008682 6,954
FOXA2 A-549 ENCODE Homo sapiens ENCSR000BRE 86,674
FOXA2 H9 ENA Homo sapiens ERP004206 138,995
FOXA2 Hep-G2 ENCODE Homo sapiens ENCSR000BNI 99,030
FOXA2 Hep-G2 ENCODE Homo sapiens ENCSR066EBK 102,190
FOXA2 CACO2 GEO Homo sapiens GSE66218 49,051
FOXA2 BJ1-hTERT GEO Homo sapiens GSE90454 15,571
FOXA2 BJ1-hTERT CDT1_Mimo GEO Homo sapiens GSE90454 1,964
FOXA2 BJ1-hTERT FoxHnf1aCoExp GEO Homo sapiens GSE90454 30,403
FOXA2 BJ1-hTERT GATA4 GEO Homo sapiens GSE90454 6,890
FOXA2 BJ1-hTERT Mimo GEO Homo sapiens GSE90454 21,416
FOXA2 BJ1-hTERT Mimo_Release GEO Homo sapiens GSE90454 9,194
FOXA2 BJ1-hTERT MimosinePlus GEO Homo sapiens GSE90454 26,241
FOXA2 BJ1-hTERT MimosineRelease GEO Homo sapiens GSE90454 12,330
FOXA2 BJ1-hTERT Unind GEO Homo sapiens GSE90454 4,255
FOXA2 BJ1-hTERT CDT1 GEO Homo sapiens GSE92491 50,395
FOXA2 BJ1-hTERT FOXA2_GATA4_Coexp GEO Homo sapiens GSE92491 79,179
FOXA2 BJ1-hTERT Mimo GEO Homo sapiens GSE92491 52,049
FOXA2 BJ1-hTERT MimoRelease GEO Homo sapiens GSE92491 44,756
FOXA2 A-549 GEO Homo sapiens GSE90454 101,277
FOXA2 Hep-G2 GEO Homo sapiens GSE90454 83,889
FOXA2 KerCT GEO Homo sapiens GSE90454 71,142
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.