FOXA1

Information FOXA1

Description

This gene encodes a member of the forkhead class of DNA-binding proteins. These hepatocyte nuclear factors are transcriptional activators for liver-specific transcripts such as albumin and transthyretin, and they also interact with chromatin. Similar family members in mice have roles in the regulation of metabolism and in the differentiation of the pancreas and liver. [provided by RefSeq, Jul 2008]

Full Name

forkhead box A1

Source NCBI

ReMap Statistics

Datasets
129
Biotypes
25
Peaks
8,760,779
Non-redundant peaks
1,010,766

TF Classification

Super Class
Helix-turn-helix domains
Class
Fork head / winged helix factors
Familly
Forkhead box (FOX) factors
Sub Familly
FOXA

Source TFClass

External IDs

JASPAR
MA0148
Ensembl
ENSG00000129514
UniProt
P55317
Genevisible
P55317
RefSeq
NM_004496
Aliases
HNF3A; TCF3A

External links
All peaks FOXA1
Download BED file
Non redundant peaks FOXA1
Download BED file
SEQUENCES FOXA1
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for FOXA1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
FOXA1 breast tumor_Female_1 GEO Homo sapiens GSE104399 22,681
FOXA1 breast tumor_Female_2 GEO Homo sapiens GSE104399 34,634
FOXA1 breast tumor_Female_3 GEO Homo sapiens GSE104399 13,654
FOXA1 breast tumor_Female_6 GEO Homo sapiens GSE104399 3,658
FOXA1 breast tumor_Female_7 GEO Homo sapiens GSE104399 6,415
FOXA1 breast tumor_Male_1 GEO Homo sapiens GSE104399 16,031
FOXA1 breast tumor_Male_13 GEO Homo sapiens GSE104399 27,246
FOXA1 breast tumor_Male_14 GEO Homo sapiens GSE104399 49,170
FOXA1 breast tumor_Male_19 GEO Homo sapiens GSE104399 31,975
FOXA1 breast tumor_Male_3 GEO Homo sapiens GSE104399 19,078
FOXA1 breast tumor_Male_4 GEO Homo sapiens GSE104399 26,909
FOXA1 breast tumor_Male_6 GEO Homo sapiens GSE104399 6,949
FOXA1 HEK293T ENCODE Homo sapiens ENCSR094WHO 518
FOXA1 Ishikawa ENCODE Homo sapiens ENCSR000BKW 6,181
FOXA1 liver ENCODE Homo sapiens ENCSR324RCI 22,512
FOXA1 liver ENCODE Homo sapiens ENCSR735KEY 19,244
FOXA1 liver ENA Homo sapiens ERP002306 49,212
FOXA1 LNCaP ENA Homo sapiens ERP001226 106,487
FOXA1 ZR751 E2_TAM ENA Homo sapiens ERP000380 65,608
FOXA1 A-549 ENCODE Homo sapiens ENCSR000BPX 63,580
FOXA1 A-549 ENCODE Homo sapiens ENCSR000BRD 39,541
FOXA1 Hep-G2 ENCODE Homo sapiens ENCSR000BLE 102,115
FOXA1 Hep-G2 ENCODE Homo sapiens ENCSR000BMO 85,953
FOXA1 Hep-G2 ENCODE Homo sapiens ENCSR267DFA 7,834
FOXA1 K-562 ENCODE Homo sapiens ENCSR819LHG 332
FOXA1 MCF-7 ENCODE Homo sapiens ENCSR126YEB 49,194
FOXA1 MCF-7 ENA Homo sapiens ERP000380 53,314
FOXA1 MCF-7 E2_TAM ENA Homo sapiens ERP000380 59,071
FOXA1 MCF-7 TAMR_E2_TAM ENA Homo sapiens ERP000380 44,160
FOXA1 MCF-7 ENA Homo sapiens ERP001226 78,000
FOXA1 MDA-MB-453 ENA Homo sapiens ERP001226 149,222
FOXA1 T-47D ENCODE Homo sapiens ENCSR000BKY 103,523
FOXA1 T-47D E2_TAM ENA Homo sapiens ERP000380 51,562
FOXA1 22Rv1 EtOH GEO Homo sapiens GSE80742 25,350
FOXA1 22Rv1 R1881 GEO Homo sapiens GSE80742 45,506
FOXA1 22Rv1 GEO Homo sapiens GSE85558 23,687
FOXA1 22Rv1 Dox GEO Homo sapiens GSE85558 48,174
FOXA1 DU145 GEO Homo sapiens GSE47987 4,223
FOXA1 DU145 FOXA1 GEO Homo sapiens GSE47987 105,720
FOXA1 DU145 FOXA1_ARC562S GEO Homo sapiens GSE47987 119,448
FOXA1 DU145 FOXA1_ARQ6540X GEO Homo sapiens GSE47987 93,843
FOXA1 DU145 FOXA1_HIGH GEO Homo sapiens GSE47987 82,049
FOXA1 LNCaP DHT GEO Homo sapiens GSE28264 48,486
FOXA1 LNCaP ETOH GEO Homo sapiens GSE28264 82,844
FOXA1 LNCaP 1F5 GEO Homo sapiens GSE30623 37,844
FOXA1 LNCaP 1F5_SIFOXA1 GEO Homo sapiens GSE30623 9,934
FOXA1 LNCaP SHCTR_R1881 GEO Homo sapiens GSE37345 100,698
FOXA1 LNCaP SHFOXA1_R1881 GEO Homo sapiens GSE37345 79,528
FOXA1 LNCaP GEO Homo sapiens GSE52725 43,431
FOXA1 LNCaP GEO Homo sapiens GSE56288 31,210
FOXA1 LNCaP DHT24H GEO Homo sapiens GSE58428 25,514
FOXA1 LNCaP ETOH24H GEO Homo sapiens GSE58428 73,320
FOXA1 LNCaP GEO Homo sapiens GSE64656 78,192
FOXA1 LNCaP ETOH GEO Homo sapiens GSE69043 1,612
FOXA1 LNCaP PHFRPMIFCS GEO Homo sapiens GSE69043 91,447
FOXA1 LNCaP R1881 GEO Homo sapiens GSE69043 75,508
FOXA1 LNCaP SHGATA2_ETOH GEO Homo sapiens GSE69043 146
FOXA1 LNCaP SHGATA2_R1881 GEO Homo sapiens GSE69043 45,805
FOXA1 LNCaP DHT GEO Homo sapiens GSE83860 201,192
FOXA1 LNCaP DHT_TNFA GEO Homo sapiens GSE83860 248,728
FOXA1 LNCaP DMSO GEO Homo sapiens GSE83860 194,305
FOXA1 LNCaP TNFA GEO Homo sapiens GSE83860 245,271
FOXA1 LNCaP GEO Homo sapiens GSE85558 113,811
FOXA1 LNCaP HNF4G_ovexp GEO Homo sapiens GSE85558 118,239
FOXA1 PDAC GEO Homo sapiens GSE64557 49,994
FOXA1 PDAC KOKLF5 GEO Homo sapiens GSE64557 51,401
FOXA1 PDAC SHCTR GEO Homo sapiens GSE64557 49,524
FOXA1 prostate tumor_tissue1 GEO Homo sapiens GSE114385 1,186
FOXA1 prostate tumor_tissue2 GEO Homo sapiens GSE114385 621
FOXA1 prostate tumor_tissue3 GEO Homo sapiens GSE114385 2,113
FOXA1 prostate tumor_tissue4 GEO Homo sapiens GSE114385 615
FOXA1 VCaP ETOH GEO Homo sapiens GSE56086 234,228
FOXA1 VCaP R1881 GEO Homo sapiens GSE56086 237,295
FOXA1 VCaP SHCTR_R1881 GEO Homo sapiens GSE56086 198,856
FOXA1 VCaP SHPIAS1_R1881 GEO Homo sapiens GSE56086 200,984
FOXA1 VCaP DHT24H GEO Homo sapiens GSE58428 67,971
FOXA1 VCaP ETOH24H GEO Homo sapiens GSE58428 48,984
FOXA1 ZR751 GEO Homo sapiens GSE72249 79,816
FOXA1 ZR751 DEX GEO Homo sapiens GSE72249 76,364
FOXA1 ZR751 E2 GEO Homo sapiens GSE72249 67,789
FOXA1 Huh-7 ASYNC GEO Homo sapiens GSE39241 5,115
FOXA1 Huh-7 MITO GEO Homo sapiens GSE39241 60
FOXA1 LNCaP-abl GEO Homo sapiens GSE63034 71,936
FOXA1 LNCaP-abl SHCREB1 GEO Homo sapiens GSE63034 176,338
FOXA1 LNCaP-abl SHCTR GEO Homo sapiens GSE63034 166,109
FOXA1 MCF-7 E2 GEO Homo sapiens GSE23852 67,736
FOXA1 MCF-7 ETOH GEO Homo sapiens GSE23852 60,158
FOXA1 MCF-7 SICTR GEO Homo sapiens GSE40129 92,964
FOXA1 MCF-7 SIGATA GEO Homo sapiens GSE40129 115,817
FOXA1 MCF-7 GEO Homo sapiens GSE59530 31,688
FOXA1 MCF-7 E2 GEO Homo sapiens GSE59530 33,650
FOXA1 MCF-7 E2_TNF GEO Homo sapiens GSE59530 32,025
FOXA1 MCF-7 TNF GEO Homo sapiens GSE59530 38,057
FOXA1 MCF-7 GEO Homo sapiens GSE60270 22,004
FOXA1 MCF-7 E2 GEO Homo sapiens GSE60270 77,723
FOXA1 MCF-7 GEO Homo sapiens GSE72249 65,783
FOXA1 MCF-7 DEX GEO Homo sapiens GSE72249 60,680
FOXA1 MCF-7 E2 GEO Homo sapiens GSE72249 62,142
FOXA1 MCF-7 4OH-Tam GEO Homo sapiens GSE75201 55,123
FOXA1 MCF-7 GEO Homo sapiens GSE80808 39,207
FOXA1 MCF-7 GEO Homo sapiens GSE81714 59,074
FOXA1 MCF-7 siCT GEO Homo sapiens GSE81714 155,777
FOXA1 MDA-MB-453 DHT GEO Homo sapiens GSE45201 87,728
FOXA1 NCI-H3122 GEO Homo sapiens GSE39998 48,899
FOXA1 T-47D GEO Homo sapiens GSE72249 26,680
FOXA1 T-47D DEX GEO Homo sapiens GSE72249 21,678
FOXA1 T-47D E2 GEO Homo sapiens GSE72249 20,753
FOXA1 T-47D DMSO GEO Homo sapiens GSE84593 63,567
FOXA1 A1A3 Brg1KD_Dex GEO Homo sapiens GSE112491 4,214
FOXA1 A1A3 Brg1KD_EtOH GEO Homo sapiens GSE112491 3,007
FOXA1 A1A3 Dex GEO Homo sapiens GSE112491 4,963
FOXA1 A1A3 EtOH GEO Homo sapiens GSE112491 3,755
FOXA1 T47D-A1-2 Dex GEO Homo sapiens GSE112491 6,740
FOXA1 T47D-A1-2 EtOH GEO Homo sapiens GSE112491 2,779
FOXA1 MCF-7-TAMR-1 4OHT GEO Homo sapiens GSE113092 110,508
FOXA1 MCF-7-TAMR-1 E2 GEO Homo sapiens GSE113092 159,501
FOXA1 MCF-7-TAMR-1 VEH GEO Homo sapiens GSE113092 135,880
FOXA1 MCF-7-WS8 4OHT GEO Homo sapiens GSE113092 125,043
FOXA1 MCF-7-WS8 VEH GEO Homo sapiens GSE113092 94,971
FOXA1 LNCaP-C4-2B GEO Homo sapiens GSE40050 12,297
FOXA1 LNCaP-C4-2B DHT GEO Homo sapiens GSE40050 19,883
FOXA1 MCF-7-TAMR-1 4OH-Tam GEO Homo sapiens GSE75201 66,798
FOXA1 22Rv1 GEO Homo sapiens GSE96652 58,264
FOXA1 LNCaP GEO Homo sapiens GSE94682 93,240
FOXA1 LNCaP r1881 GEO Homo sapiens GSE94682 98,660
FOXA1 VCaP GEO Homo sapiens GSE96652 293,244
FOXA1 VCaP siERG GEO Homo sapiens GSE96652 316,826
FOXA1 T-47D CR3flp GEO Homo sapiens GSE99479 76,385
FOXA1 T-47D flp-ctrl GEO Homo sapiens GSE99479 36,981
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

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AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.