FLC

Information FLC

Description

MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3? to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.

Full Name

K-box region and MADS-box transcription factor family protein

Source NCBI

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
936
Non-redundant peaks
936

TF Classification

Familly
MADS
Sub Familly
MADS box protein FLOWERING LOCUS F (FLF)

Source AtTFDB

External IDs

JASPAR
MA0558
Ensembl
AT5G10140
UniProt
Q9S7Q7
Genevisible
Q9S7Q7
RefSeq
NM_121052.3
Aliases
All peaks FLC
Download BED file
Non redundant peaks FLC
Download BED file
SEQUENCES FLC
Download FASTA file
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Datasets Table for FLC

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
FLC Col-FRI Col-FRI_aerial-part 2w GEO Arabidopsis thaliana GSE89889 936
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.