CTCF

Information CTCF

Description

This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. Depending upon the context of the site, the protein can bind a histone acetyltransferase (HAT)-containing complex and function as a transcriptional activator or bind a histone deacetylase (HDAC)-containing complex and function as a transcriptional repressor. If the protein is bound to a transcriptional insulator element, it can block communication between enhancers and upstream promoters, thereby regulating imprinted expression. Mutations in this gene have been associated with invasive breast cancers, prostate cancers, and Wilms' tumors. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2010]

Full Name

CCCTC-binding factor

Source NCBI

ReMap Statistics

Datasets
412
Biotypes
171
Peaks
19,350,383
Non-redundant peaks
968,772

TF Classification

Super Class
Zinc-coordinating DNA-binding domains
Class
C2H2 zinc finger factors
Familly
More than 3 adjacent zinc finger factors
Sub Familly
CTCF-like factors

Source TFClass

External IDs

JASPAR
MA0139
Ensembl
ENSG00000102974
UniProt
P49711
Genevisible
P49711
RefSeq
NM_001191022
Aliases
MRD21
All peaks CTCF
Download BED file
Non redundant peaks CTCF
Download BED file
SEQUENCES CTCF
Download FASTA file
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Datasets Table for CTCF

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
CTCF 22Rv1 hydroxy_10nM_4h ENCODE Homo sapiens ENCSR847XGE 49,183
CTCF 22Rv1 ENCODE Homo sapiens ENCSR857PBV 49,761
CTCF artery tibial ENCODE Homo sapiens ENCSR699BEK 41,379
CTCF astrocyte ENCODE Homo sapiens ENCSR000AOO 42,488
CTCF astrocyte spinal_cord ENCODE Homo sapiens ENCSR000DSU 58,894
CTCF astrocyte cerebellum ENCODE Homo sapiens ENCSR000DSZ 53,405
CTCF BE2C ENCODE Homo sapiens ENCSR000DQD 56,437
CTCF BJ ENCODE Homo sapiens ENCSR000DQI 53,073
CTCF breast epithelium ENCODE Homo sapiens ENCSR304XUZ 20,719
CTCF breast epithelium ENCODE Homo sapiens ENCSR661NXJ 38,537
CTCF breast epithelium ENCODE Homo sapiens ENCSR697YIN 37,848
CTCF CACO2 ENCODE Homo sapiens ENCSR000DQN 46,068
CTCF CD14 ENCODE Homo sapiens ENCSR000ATN 43,336
CTCF CHRF28811 ENA Homo sapiens ERP008568 24,855
CTCF colon transverse ENCODE Homo sapiens ENCSR102CSD 47,255
CTCF colon sigmoid ENCODE Homo sapiens ENCSR222SQE 19,019
CTCF colon transverse ENCODE Homo sapiens ENCSR236YGF 38,167
CTCF colon transverse ENCODE Homo sapiens ENCSR449SEF 18,882
CTCF colon transverse ENCODE Homo sapiens ENCSR558HTE 4,212
CTCF colon transverse ENCODE Homo sapiens ENCSR608WPS 31,805
CTCF colon sigmoid ENCODE Homo sapiens ENCSR721AHD 28,698
CTCF colon transverse ENCODE Homo sapiens ENCSR769WKR 33,762
CTCF colon transverse ENCODE Homo sapiens ENCSR833FWC 45,661
CTCF colon transverse ENCODE Homo sapiens ENCSR907BES 25,354
CTCF colon sigmoid ENCODE Homo sapiens ENCSR925GDS 12,220
CTCF DND41 ENCODE Homo sapiens ENCSR000AQU 73,489
CTCF DOHH2 ENCODE Homo sapiens ENCSR084RDK 69,677
CTCF endothelial umbilical-vein ENCODE Homo sapiens ENCSR000ALA 43,329
CTCF endothelial umbilical-vein ENCODE Homo sapiens ENCSR000DLW 44,823
CTCF endothelial brain-microvascular ENCODE Homo sapiens ENCSR000DTA 72,694
CTCF endothelial umbilical-vein ENCODE Homo sapiens ENCSR000DVP 57,113
CTCF epithelial mammary ENCODE Homo sapiens ENCSR000ALV 39,920
CTCF epithelial esophagus ENCODE Homo sapiens ENCSR000DTR 43,756
CTCF epithelial mammary ENCODE Homo sapiens ENCSR000DUS 54,918
CTCF epithelial kidney ENCODE Homo sapiens ENCSR000DVH 65,522
CTCF epithelial retinal_pigment ENCODE Homo sapiens ENCSR000DVI 53,606
CTCF epithelial proximal_tubule ENCODE Homo sapiens ENCSR000DXD 64,708
CTCF erythroblast adult_erythroblasts GEO Homo sapiens GSE102184 63,294
CTCF fetal erythroblasts GEO Homo sapiens GSE102184 49,969
CTCF fibroblast LUNG ENCODE Homo sapiens ENCSR000ANO 41,948
CTCF fibroblast DERMAL ENCODE Homo sapiens ENCSR000APM 43,589
CTCF fibroblast SKIN_LEG ENCODE Homo sapiens ENCSR000DPG 59,761
CTCF fibroblast LUNG ENCODE Homo sapiens ENCSR000DPM 47,118
CTCF fibroblast PEDAL_DIGIT_SKIN ENCODE Homo sapiens ENCSR000DPP 34,815
CTCF fibroblast GINGIVA ENCODE Homo sapiens ENCSR000DPS 55,544
CTCF fibroblast SKIN_ABDOMEN ENCODE Homo sapiens ENCSR000DPV 46,107
CTCF fibroblast AORTIC_ADVENTITIA ENCODE Homo sapiens ENCSR000DPY 51,812
CTCF fibroblast CARDIAC ENCODE Homo sapiens ENCSR000DTF 59,812
CTCF fibroblast FORESKIN ENCODE Homo sapiens ENCSR000DUH 48,869
CTCF fibroblast MAMMARY ENCODE Homo sapiens ENCSR000DUU 43,816
CTCF fibroblast PULMONARY_ARTERY ENCODE Homo sapiens ENCSR000DUX 56,199
CTCF fibroblast LUNG ENCODE Homo sapiens ENCSR000DVA 42,823
CTCF fibroblast VILLOUS_MESENCHYME ENCODE Homo sapiens ENCSR000DVQ 55,893
CTCF fibroblast FORESKIN ENCODE Homo sapiens ENCSR000DWQ 49,877
CTCF fibroblast LUNG ENCODE Homo sapiens ENCSR000DWY 44,314
CTCF GM06990 ENCODE Homo sapiens ENCSR000DQW 50,480
CTCF GM10248 ENCODE Homo sapiens ENCSR000DKP 19,104
CTCF GM10266 ENCODE Homo sapiens ENCSR000DKR 28,081
CTCF GM12801 ENCODE Homo sapiens ENCSR000DQY 22,885
CTCF GM12864 ENCODE Homo sapiens ENCSR000DRB 43,554
CTCF GM12865 ENCODE Homo sapiens ENCSR000DRE 40,328
CTCF GM12866 ENCODE Homo sapiens ENCSR000DRF 56,077
CTCF GM12867 ENCODE Homo sapiens ENCSR000DRH 50,097
CTCF GM12868 ENCODE Homo sapiens ENCSR000DRI 52,699
CTCF GM12869 ENCODE Homo sapiens ENCSR000DRJ 59,921
CTCF GM12870 ENCODE Homo sapiens ENCSR000DRK 49,157
CTCF GM12872 ENCODE Homo sapiens ENCSR000DRN 41,811
CTCF GM12873 ENCODE Homo sapiens ENCSR000DRP 49,968
CTCF GM12874 ENCODE Homo sapiens ENCSR000DRR 49,404
CTCF GM12875 ENCODE Homo sapiens ENCSR000DRU 46,377
CTCF GM12878 ENCODE Homo sapiens ENCSR000AKB 34,372
CTCF GM12878 ENCODE Homo sapiens ENCSR000DKV 54,504
CTCF GM12878 ENCODE Homo sapiens ENCSR000DRZ 42,365
CTCF GM12878 ENCODE Homo sapiens ENCSR000DZN 46,767
CTCF GM12878 ENA Homo sapiens ERP002246 25,766
CTCF GM12891 ENCODE Homo sapiens ENCSR000DKX 121,765
CTCF GM12892 ENCODE Homo sapiens ENCSR000DKY 152,664
CTCF GM13976 ENCODE Homo sapiens ENCSR000DKZ 13,682
CTCF GM13977 ENCODE Homo sapiens ENCSR000DLB 41,638
CTCF GM19238 ENCODE Homo sapiens ENCSR000DLD 95,395
CTCF GM19239 ENCODE Homo sapiens ENCSR000DLE 123,495
CTCF GM19240 ENCODE Homo sapiens ENCSR000DLF 103,705
CTCF GM20000 ENCODE Homo sapiens ENCSR000DLG 27,909
CTCF H54 ENCODE Homo sapiens ENCSR000DKN 67,906
CTCF HEK293 ENCODE Homo sapiens ENCSR000DTW 66,246
CTCF HEK293 ENCODE Homo sapiens ENCSR617IFZ 45,490
CTCF HEK293T GEO Homo sapiens GSE103651 39,314
CTCF HeLa dC9Sun-D3A_CDCC85C GEO Homo sapiens GSE107607 59,053
CTCF HeLa dC9Sun-D3A_MIR152 GEO Homo sapiens GSE107607 59,965
CTCF HeLa dC9Sun-D3AMut_MIR152 GEO Homo sapiens GSE107607 52,525
CTCF HeLa dC9Sun-D3A_SHB GEO Homo sapiens GSE107607 54,351
CTCF hepatocyte ENCODE Homo sapiens ENCSR252QYR 56,272
CTCF hepatocyte ENA Homo sapiens ERP000395 65,496
CTCF HFF ENCODE Homo sapiens ENCSR000DUM 42,242
CTCF Ishikawa ENCODE Homo sapiens ENCSR000BQE 20,561
CTCF islet ENA Homo sapiens ERP004003 63,252
CTCF KARPAS422 ENCODE Homo sapiens ENCSR113REG 59,667
CTCF keratinocyte ENCODE Homo sapiens ENCSR000ALJ 63,434
CTCF keratinocyte ENCODE Homo sapiens ENCSR000DNC 70,261
CTCF keratinocyte ENCODE Homo sapiens ENCSR000DWX 68,211
CTCF kidney ENCODE Homo sapiens ENCSR000DMC 27,523
CTCF liver ENCODE Homo sapiens ENCSR254YRM 37,956
CTCF liver right-lobe-of ENCODE Homo sapiens ENCSR911GFJ 36,918
CTCF LNCaP ENCODE Homo sapiens ENCSR000DME 35,086
CTCF LNCaP ENCODE Homo sapiens ENCSR000DMF 41,298
CTCF LNCaP ENCODE Homo sapiens ENCSR315NAC 44,451
CTCF LNCaP hydroxy_10nM_4h ENCODE Homo sapiens ENCSR673WZL 52,841
CTCF Loucy ENCODE Homo sapiens ENCSR464DKE 73,361
CTCF lung ENCODE Homo sapiens ENCSR000DMH 28,507
CTCF lung left_upper-lobe ENCODE Homo sapiens ENCSR027FSZ 44,284
CTCF lung left_upper-lobe ENCODE Homo sapiens ENCSR799TJD 34,827
CTCF lung left_upper-lobe ENCODE Homo sapiens ENCSR964BKO 31,705
CTCF lung left_upper-lobe ENCODE Homo sapiens ENCSR970UZD 24,750
CTCF lung left_upper-lobe ENCODE Homo sapiens ENCSR972LYL 40,030
CTCF medulloblastoma ENCODE Homo sapiens ENCSR000DMY 42,028
CTCF myoblast skeletal_muscle ENCODE Homo sapiens ENCSR000ANE 53,123
CTCF myotube ENCODE Homo sapiens ENCSR000ANS 55,058
CTCF NB4 ENCODE Homo sapiens ENCSR000DWN 50,232
CTCF neural progenitor ENCODE Homo sapiens ENCSR125NBL 63,014
CTCF neural ENCODE Homo sapiens ENCSR822CEA 51,998
CTCF osteoblast ENCODE Homo sapiens ENCSR000APF 63,780
CTCF pancreas ENCODE Homo sapiens ENCSR000DND 48,146
CTCF pancreas body ENCODE Homo sapiens ENCSR265PFQ 43,336
CTCF pancreas body ENCODE Homo sapiens ENCSR307PFP 39,420
CTCF pancreas body ENCODE Homo sapiens ENCSR408XTO 50,101
CTCF pancreas body ENCODE Homo sapiens ENCSR484DDO 41,792
CTCF pancreas body ENCODE Homo sapiens ENCSR572DUJ 32,572
CTCF prostate epithelial ENCODE Homo sapiens ENCSR196HOM 70,905
CTCF prostate gland ENCODE Homo sapiens ENCSR720USO 52,458
CTCF prostate gland ENCODE Homo sapiens ENCSR829HTO 37,094
CTCF spleen ENCODE Homo sapiens ENCSR000DNI 39,305
CTCF spleen ENCODE Homo sapiens ENCSR028YEV 31,108
CTCF spleen ENCODE Homo sapiens ENCSR234HEM 16,695
CTCF spleen ENCODE Homo sapiens ENCSR482PMN 32,770
CTCF spleen ENCODE Homo sapiens ENCSR692ILH 18,201
CTCF VCaP ENCODE Homo sapiens ENCSR265ARE 56,280
CTCF WA09 GEO Homo sapiens GSE105028 14,172
CTCF WA09 heat-shock GEO Homo sapiens GSE105028 7,616
CTCF ZR751 ENA Homo sapiens ERP000783 43,582
CTCF A-673 ENCODE Homo sapiens ENCSR611JJS 66,058
CTCF A-549 ENCODE Homo sapiens ENCSR000AUE 57,883
CTCF A-549 ENCODE Homo sapiens ENCSR000AUF 69,918
CTCF A-549 ENCODE Homo sapiens ENCSR000BHV 37,231
CTCF A-549 ENCODE Homo sapiens ENCSR000BHW 37,605
CTCF A-549 ENCODE Homo sapiens ENCSR000DNA 55,336
CTCF A-549 ENCODE Homo sapiens ENCSR000DPF 66,068
CTCF A-549 ENCODE Homo sapiens ENCSR000DYD 46,736
CTCF GM12871 ENCODE Homo sapiens ENCSR000DRL 61,473
CTCF GM23338 ENCODE Homo sapiens ENCSR932ZMX 112,600
CTCF GM23338 ENCODE Homo sapiens ENCSR987GXT 83,254
CTCF Hep-G2 ENCODE Homo sapiens ENCSR000AMA 54,128
CTCF Hep-G2 ENCODE Homo sapiens ENCSR000BIE 63,410
CTCF Hep-G2 ENCODE Homo sapiens ENCSR000DLS 57,779
CTCF Hep-G2 ENCODE Homo sapiens ENCSR000DUG 62,433
CTCF Hep-G2 ENA Homo sapiens ERP000209 51,676
CTCF HL-60 ENCODE Homo sapiens ENCSR000DUP 36,487
CTCF HL-60 ENA Homo sapiens ERP008568 36,093
CTCF HUDEP-2 30min GEO Homo sapiens GSE104676 58,456
CTCF IMR-90 ENCODE Homo sapiens ENCSR000EFI 53,013
CTCF K-562 ENCODE Homo sapiens ENCSR000AKO 57,456
CTCF K-562 ENCODE Homo sapiens ENCSR000BPJ 53,476
CTCF K-562 ENCODE Homo sapiens ENCSR000DMA 67,159
CTCF K-562 ENCODE Homo sapiens ENCSR000DWE 48,316
CTCF K-562 ENCODE Homo sapiens ENCSR000EGM 59,212
CTCF MCF-10A ENA Homo sapiens ERP000783 34,789
CTCF MCF-7 ENCODE Homo sapiens ENCSR000AHD 59,708
CTCF MCF-7 ENCODE Homo sapiens ENCSR000DML 86,705
CTCF MCF-7 ENCODE Homo sapiens ENCSR000DMO 118,477
CTCF MCF-7 ENCODE Homo sapiens ENCSR000DMR 75,222
CTCF MCF-7 ENCODE Homo sapiens ENCSR000DMS 54,555
CTCF MCF-7 ENCODE Homo sapiens ENCSR000DMV 101,702
CTCF MCF-7 ENCODE Homo sapiens ENCSR000DWH 65,362
CTCF MCF-7 ENCODE Homo sapiens ENCSR560BUE 79,368
CTCF MCF-7 E2_SHCTCF ENA Homo sapiens ERP000209 37,736
CTCF MCF-7 E2_SHCTR ENA Homo sapiens ERP000209 89,280
CTCF MCF-7 ENA Homo sapiens ERP000380 49,533
CTCF MCF-7 E2 ENA Homo sapiens ERP000380 55,070
CTCF MCF-7 TAM ENA Homo sapiens ERP000380 52,770
CTCF MCF-7 TAM ENA Homo sapiens ERP000783 46,913
CTCF MCF-7 GEO Homo sapiens GSE107749 86,154
CTCF MCF-7 estrogen_45min GEO Homo sapiens GSE107749 80,530
CTCF NB69 GEO Homo sapiens GSE101295 72,369
CTCF NCI-H929 ENCODE Homo sapiens ENCSR634OAQ 52,064
CTCF OCI-Ly1 ENCODE Homo sapiens ENCSR072EUE 67,103
CTCF OCI-Ly3 ENCODE Homo sapiens ENCSR756ZKG 77,452
CTCF OCI-Ly7 ENCODE Homo sapiens ENCSR027HML 58,825
CTCF PANC-1 ENCODE Homo sapiens ENCSR203QEB 38,645
CTCF PC-3 ENCODE Homo sapiens ENCSR359LOD 76,996
CTCF RWPE-1 ENCODE Homo sapiens ENCSR303GFI 32,768
CTCF RWPE-2 ENCODE Homo sapiens ENCSR856JJB 63,076
CTCF SH-SY5Y GEO Homo sapiens GSE101295 57,523
CTCF SK-N-AS GEO Homo sapiens GSE101295 63,238
CTCF SK-N-SH ENCODE Homo sapiens ENCSR000BLX 54,518
CTCF SK-N-SH ENCODE Homo sapiens ENCSR000DXQ 67,983
CTCF SK-N-SH ENCODE Homo sapiens ENCSR000EIC 52,670
CTCF SK-N-SH ENCODE Homo sapiens ENCSR541AMF 66,569
CTCF SU-DHL-6 ENCODE Homo sapiens ENCSR125DKL 44,527
CTCF T-47D ENCODE Homo sapiens ENCSR000BNO 29,379
CTCF THP-1 eGFP-IFNb-r1 GEO Homo sapiens GSE103477 26,579
CTCF THP-1 Pam3csk-000m-Flavo-000m GEO Homo sapiens GSE103477 64,229
CTCF THP-1 Pam3csk-000m-Flavo-240m GEO Homo sapiens GSE103477 62,579
CTCF THP-1 Pam3csk-020m-Flavo-000m GEO Homo sapiens GSE103477 60,846
CTCF THP-1 Pam3csk-025m-Flavo-000m GEO Homo sapiens GSE103477 64,779
CTCF THP-1 Pam3csk-030m-Flavo-000m GEO Homo sapiens GSE103477 60,239
CTCF THP-1 Pam3csk-045m-Flavo-000m GEO Homo sapiens GSE103477 62,938
CTCF THP-1 Pam3csk-060m-Flavo-000m GEO Homo sapiens GSE103477 60,023
CTCF THP-1 Pam3csk-120m-Flavo-000m GEO Homo sapiens GSE103477 53,278
CTCF THP-1 Pam3csk-150m-Flavo-030m GEO Homo sapiens GSE103477 63,837
CTCF THP-1 Pam3csk-180m-Flavo-060m GEO Homo sapiens GSE103477 63,405
CTCF THP-1 Pam3csk-360m-Flavo-240m GEO Homo sapiens GSE103477 63,890
CTCF THP-1 PMA_Dex-0h GEO Homo sapiens GSE103477 31,561
CTCF THP-1 PMA_Dex-6h GEO Homo sapiens GSE103477 41,906
CTCF THP-1 siCtrl-eGFP-Pam3csk-0h GEO Homo sapiens GSE103477 50,391
CTCF THP-1 siCtrl-eGFP-Pam3csk-4h GEO Homo sapiens GSE103477 46,829
CTCF THP-1 siCtrl-NS1-Pam3csk-0h GEO Homo sapiens GSE103477 47,895
CTCF THP-1 siCtrl-NS1-Pam3csk-4h GEO Homo sapiens GSE103477 47,409
CTCF THP-1 siCtrl-NS1-Pam3csk-7h-Flavo-3h GEO Homo sapiens GSE103477 40,821
CTCF THP-1 siNIPBL-eGFP-Pam3csk-4h GEO Homo sapiens GSE103477 43,306
CTCF THP-1 siNIPBL-NS1-Pam3csk-4h GEO Homo sapiens GSE103477 44,132
CTCF THP-1 siNIPBL-NS1-Pam3csk-7h-Flavo-3h GEO Homo sapiens GSE103477 47,530
CTCF THP-1 siWAPL-eGFP-Pam3csk-4h GEO Homo sapiens GSE103477 47,692
CTCF THP-1 siWAPL-NS1-Pam3csk-4h GEO Homo sapiens GSE103477 49,965
CTCF THP-1 siWAPL-NS1-Pam3csk-7h-Flavo-3h GEO Homo sapiens GSE103477 44,480
CTCF U-937 ENA Homo sapiens ERP008568 13,522
CTCF WA01 ENCODE Homo sapiens ENCSR000AMF 85,840
CTCF WA01 ENCODE Homo sapiens ENCSR000BNH 49,862
CTCF WA01 ENCODE Homo sapiens ENCSR000DLK 53,628
CTCF WERI-Rb-1 ENCODE Homo sapiens ENCSR000DXW 66,724
CTCF WI-38 ENCODE Homo sapiens ENCSR000DYB 30,691
CTCF HeLa-S3 ENCODE Homo sapiens ENCSR000AOA 67,356
CTCF B-cell ENCODE Homo sapiens ENCSR000AUV 47,900
CTCF HCT-116 ENCODE Homo sapiens ENCSR000BSE 40,168
CTCF HeLa-S3 ENCODE Homo sapiens ENCSR000DLO 58,464
CTCF cardiac muscle ENCODE Homo sapiens ENCSR000DTI 53,937
CTCF choroid-plexus epithelial ENCODE Homo sapiens ENCSR000DTL 66,146
CTCF HCT-116 ENCODE Homo sapiens ENCSR000DTO 52,432
CTCF HeLa-S3 ENCODE Homo sapiens ENCSR000DUB 60,224
CTCF bonchial epithelial ENCODE Homo sapiens ENCSR000DXI 69,009
CTCF esophagus squamous-epithelium ENCODE Homo sapiens ENCSR003SZZ 32,841
CTCF adrenal-gland ENCODE Homo sapiens ENCSR014GSQ 28,662
CTCF skin suprapubic ENCODE Homo sapiens ENCSR038FOS 6,592
CTCF neuron bipolar_doxy_4d ENCODE Homo sapiens ENCSR066BZZ 82,913
CTCF cardiac right-atrium-auricular-region ENCODE Homo sapiens ENCSR066GBX 22,245
CTCF gastrocnemius-medialis ENCODE Homo sapiens ENCSR071XWO 25,888
CTCF esophagus muscularis-mucosa ENCODE Homo sapiens ENCSR074SFL 29,899
CTCF omental-fat-pad ENCODE Homo sapiens ENCSR089DTY 4,041
CTCF thyroid-gland ENCODE Homo sapiens ENCSR145HBC 44,659
CTCF gastroesophageal-sphincter ENCODE Homo sapiens ENCSR146BGM 47,007
CTCF stomach ENCODE Homo sapiens ENCSR173AIR 24,042
CTCF coronary-artery ENCODE Homo sapiens ENCSR175FLL 39,118
CTCF gastroesophageal-sphincter ENCODE Homo sapiens ENCSR186NVR 47,697
CTCF gastroesophageal-sphincter ENCODE Homo sapiens ENCSR206ETG 41,331
CTCF omental-fat-pad ENCODE Homo sapiens ENCSR225OKX 11,864
CTCF HCT-116 ENCODE Homo sapiens ENCSR240PRQ 70,426
CTCF skin lower-leg ENCODE Homo sapiens ENCSR252XWG 18,894
CTCF smooth-muscle-cell ENCODE Homo sapiens ENCSR261VAS 48,472
CTCF esophagus muscularis-mucosa ENCODE Homo sapiens ENCSR353DFU 38,213
CTCF stomach ENCODE Homo sapiens ENCSR361KVZ 30,464
CTCF Peyers-patch ENCODE Homo sapiens ENCSR375VXU 52,548
CTCF Peyers-patch ENCODE Homo sapiens ENCSR391ZKN 23,162
CTCF uterus ENCODE Homo sapiens ENCSR392SFJ 36,496
CTCF MM1-S ENCODE Homo sapiens ENCSR402IDP 53,463
CTCF adrenal-gland ENCODE Homo sapiens ENCSR408ZEE 30,575
CTCF Peyers-patch ENCODE Homo sapiens ENCSR419ANE 44,207
CTCF gastrocnemius-medialis ENCODE Homo sapiens ENCSR428BKN 31,298
CTCF skin lower-leg ENCODE Homo sapiens ENCSR430TEE 488
CTCF nerve tibial ENCODE Homo sapiens ENCSR434XLP 44,515
CTCF adrenal-gland ENCODE Homo sapiens ENCSR450BLH 46,188
CTCF esophagus squamous-epithelium ENCODE Homo sapiens ENCSR450FRI 58,398
CTCF LNCaP-C4-2B ENCODE Homo sapiens ENCSR460LGH 51,115
CTCF nerve tibial ENCODE Homo sapiens ENCSR469POZ 40,885
CTCF thyroid-gland ENCODE Homo sapiens ENCSR492ZIW 39,716
CTCF ovary ENCODE Homo sapiens ENCSR493APD 20,482
CTCF testis ENCODE Homo sapiens ENCSR494TNM 22,399
CTCF skin suprapubic ENCODE Homo sapiens ENCSR515LRI 4,984
CTCF uterus ENCODE Homo sapiens ENCSR527TPP 36,272
CTCF heart left-ventricle ENCODE Homo sapiens ENCSR544APK 58,701
CTCF ovary ENCODE Homo sapiens ENCSR548DDS 21,646
CTCF stomach ENCODE Homo sapiens ENCSR549WAU 16,913
CTCF esophagus muscularis-mucosa ENCODE Homo sapiens ENCSR559KAB 43,191
CTCF skin lower-leg ENCODE Homo sapiens ENCSR582MTM 4,341
CTCF vagina ENCODE Homo sapiens ENCSR606TNN 26,234
CTCF stomach ENCODE Homo sapiens ENCSR618QYE 894
CTCF neuron bipolar_doxy_4d ENCODE Homo sapiens ENCSR619IUE 74,941
CTCF vagina ENCODE Homo sapiens ENCSR655ECZ 16,301
CTCF gastroesophageal-sphincter ENCODE Homo sapiens ENCSR661XNQ 37,556
CTCF aorta thoracic ENCODE Homo sapiens ENCSR668BTN 44,390
CTCF cardiac-muscle ENCODE Homo sapiens ENCSR713SXF 49,953
CTCF heart left-ventricle ENCODE Homo sapiens ENCSR718SDR 49,282
CTCF thyroid-gland ENCODE Homo sapiens ENCSR744YJR 27,040
CTCF skin suprapubic ENCODE Homo sapiens ENCSR756KRS 9,676
CTCF esophagus squamous-epithelium ENCODE Homo sapiens ENCSR756URL 32,950
CTCF subcutaneous-adipose-tissue ENCODE Homo sapiens ENCSR762PCG 485
CTCF adrenal-gland ENCODE Homo sapiens ENCSR770IWO 49,367
CTCF esophagus squamous-epithelium ENCODE Homo sapiens ENCSR773JBP 39,886
CTCF neutrophil ENCODE Homo sapiens ENCSR785YRL 33,303
CTCF heart left-ventricle ENCODE Homo sapiens ENCSR791AYW 53,449
CTCF uterus ENCODE Homo sapiens ENCSR798NVH 31,796
CTCF Peyers-patch ENCODE Homo sapiens ENCSR799WDT 42,296
CTCF nerve tibial ENCODE Homo sapiens ENCSR822PJT 49,546
CTCF esophagus squamous-epithelium ENCODE Homo sapiens ENCSR838RUX 46,380
CTCF adrenal-gland ENCODE Homo sapiens ENCSR899JSO 39,510
CTCF thyroid-gland ENCODE Homo sapiens ENCSR955BIB 38,433
CTCF aorta ascending ENCODE Homo sapiens ENCSR960MDF 20,173
CTCF testis ENCODE Homo sapiens ENCSR981CID 35,198
CTCF gastrocnemius-medialis ENCODE Homo sapiens ENCSR998NQG 20,074
CTCF 81-3 ENA Homo sapiens ERP002246 33,071
CTCF 226LDM GEO Homo sapiens GSE102237 3,849
CTCF HeLa-Kyoto GEO Homo sapiens GSE102884 47,657
CTCF HeLa-Kyoto PDS5-depleted GEO Homo sapiens GSE102884 59,012
CTCF HeLa-Kyoto WAPL-depleted GEO Homo sapiens GSE102884 61,010
CTCF HeLa-Kyoto WAPL_PDS-depleted GEO Homo sapiens GSE102884 54,435
CTCF MDM GEO Homo sapiens GSE103477 30,179
CTCF MDM dNS1 GEO Homo sapiens GSE103477 30,413
CTCF MDM H5N1 GEO Homo sapiens GSE103477 31,546
CTCF MDM IFNb GEO Homo sapiens GSE103477 28,868
CTCF HCT-116 RAD21-mAC GEO Homo sapiens GSE104888 54,358
CTCF HCT-116 RAD21-mAC_500uM_auxin GEO Homo sapiens GSE104888 41,459
CTCF HSPC-CD34 GEO Homo sapiens GSE107147 42,229
CTCF HeLa-S3 synchro GEO Homo sapiens GSE108173 28,205
CTCF HeLa-S3 unsynchro GEO Homo sapiens GSE108173 54,630
CTCF ASC GEO Homo sapiens GSE21366 38,995
CTCF BJAB GEO Homo sapiens GSE31485 25,403
CTCF BL41 GEO Homo sapiens GSE31485 30,031
CTCF erythroid GEO Homo sapiens GSE67783 59,907
CTCF GM12878 GEO Homo sapiens GSE76922 43,742
CTCF GP5D GEO Homo sapiens GSE51234 52,813
CTCF GP5D SIRAD21 GEO Homo sapiens GSE51234 29,624
CTCF HEK293 GEO Homo sapiens GSE68976 14,524
CTCF HEK293 GEO Homo sapiens GSE76494 167,785
CTCF hESC GEO Homo sapiens GSE20650 18,964
CTCF hESC NAIVE GEO Homo sapiens GSE69646 64,565
CTCF hESC PRIMED GEO Homo sapiens GSE69646 29,644
CTCF HSPC GEO Homo sapiens GSE67783 317,836
CTCF islet GEO Homo sapiens GSE23784 35,825
CTCF Jurkat GEO Homo sapiens GSE68976 34,869
CTCF lymphocyte blood GEO Homo sapiens GSE46832 18,603
CTCF macrophage GEO Homo sapiens GSE118305 22,876
CTCF macrophage ZIKVneg GEO Homo sapiens GSE118305 6,787
CTCF macrophage ZIKVnpos GEO Homo sapiens GSE118305 16,293
CTCF monocyte BLOOD GEO Homo sapiens GSE43098 9,269
CTCF monocyte MACROPHAGE GEO Homo sapiens GSE43098 1
CTCF SUM159 GEO Homo sapiens GSE46055 60,476
CTCF tlymphocyte naive GEO Homo sapiens GSE74850 323
CTCF U2OS GEO Homo sapiens GSE87831 2,989
CTCF VCaP ETOH GEO Homo sapiens GSE84432 43,549
CTCF VCaP R1881 GEO Homo sapiens GSE84432 47,667
CTCF BCBL-1 GEO Homo sapiens GSE38411 81,229
CTCF 786-O NORMOXIA GEO Homo sapiens GSE78113 72,948
CTCF delta-47 GEO Homo sapiens GSE70764 35,391
CTCF GM04025 B-lymphocytes GEO Homo sapiens GSE111170 65,479
CTCF GM09236 _B-lymphocytes GEO Homo sapiens GSE111170 66,595
CTCF GM09237 B-lymphocytes GEO Homo sapiens GSE111170 71,346
CTCF GM17942 GEO Homo sapiens GSE76922 50,891
CTCF Hep-G2 GEO Homo sapiens GSE111000 19,652
CTCF Hep-G2 RELACS GEO Homo sapiens GSE111000 9,584
CTCF Hep-G2 RELACS_10000cells GEO Homo sapiens GSE111000 2,250
CTCF ID00014 GEO Homo sapiens GSE76922 53,629
CTCF ID00015 GEO Homo sapiens GSE76922 31,042
CTCF ID00016 GEO Homo sapiens GSE76922 50,493
CTCF IMR-5 GEO Homo sapiens GSE78957 29,448
CTCF IMR-90 GEO Homo sapiens GSE43070 37,599
CTCF K-562 GEO Homo sapiens GSE110681 36,748
CTCF K-562 GEO Homo sapiens GSE70482 51,763
CTCF K-562 GEO Homo sapiens GSE70764 67,402
CTCF K-562 HOXA11_dMQ1 GEO Homo sapiens GSE90691 9,118
CTCF K-562 HOXA11_MQ1Q147L GEO Homo sapiens GSE90691 3,434
CTCF K-562 HOXA13_dMQ1 GEO Homo sapiens GSE90691 11,297
CTCF K-562 HOXA13_MQ1Q147L GEO Homo sapiens GSE90691 3,982
CTCF K-562 RUNX1_dMQ1 GEO Homo sapiens GSE90691 13,630
CTCF K-562 RUNX1_MQ1Q147L GEO Homo sapiens GSE90691 647
CTCF K-562 GEO Homo sapiens GSE92879 29,283
CTCF K-562 Dox GEO Homo sapiens GSE92879 29,041
CTCF LUHMES GEO Homo sapiens GSE109706 107,501
CTCF MCF-7 GEO Homo sapiens GSE70764 58,215
CTCF MCF-7 HYPOXIA GEO Homo sapiens GSE78113 49,573
CTCF MCF-7 NORMOXIA GEO Homo sapiens GSE78113 52,371
CTCF OVCAR-8 GEO Homo sapiens GSE70764 71,435
CTCF RH4 GEO Homo sapiens GSE83726 64,321
CTCF SK-MEL-147 GEO Homo sapiens GSE94488 54,332
CTCF SK-N-SH GEO Homo sapiens GSE76815 42,631
CTCF THP-1 GEO Homo sapiens GSE69962 5,488
CTCF THP-1 2D3 GEO Homo sapiens GSE69962 7,774
CTCF WA01 EMB GEO Homo sapiens GSE52457 109,757
CTCF WA01 MESEN GEO Homo sapiens GSE52457 101,811
CTCF WA01 MESEN_STEM GEO Homo sapiens GSE52457 51,131
CTCF WA01 NEUR GEO Homo sapiens GSE52457 60,007
CTCF WA01 TROP GEO Homo sapiens GSE52457 93,301
CTCF WI-38VA13 GEO Homo sapiens GSE41048 21,595
CTCF MM1-S GEO Homo sapiens GSE43743 61,726
CTCF COLO-829 GEO Homo sapiens GSE81945 38,327
CTCF primary-epidermal-keratinocyte diff_d0 GEO Homo sapiens GSE84657 70,634
CTCF primary-epidermal-keratinocyte diff_d3 GEO Homo sapiens GSE84657 44,707
CTCF primary-epidermal-keratinocyte diff_d6 GEO Homo sapiens GSE84657 51,847
CTCF retina AB1-FW14 GEO Homo sapiens GSE86981 31,274
CTCF retina AB1-FW16 GEO Homo sapiens GSE86981 36,131
CTCF retina AB1-FW18 GEO Homo sapiens GSE86981 20,775
CTCF retina AB1-FW23 GEO Homo sapiens GSE86981 23,702
CTCF retina AB1-RB GEO Homo sapiens GSE86981 30,033
CTCF MIA-PaCa-2 GEO Homo sapiens GSE88734 30,770
CTCF HCT-116 GEO Homo sapiens GSE92879 31,657
CTCF HAP1 GEO Homo sapiens GSE94992 39,811
CTCF HAP1 SCC4KO GEO Homo sapiens GSE94992 30,908
CTCF HAP1 WaplKO-33 GEO Homo sapiens GSE94992 43,210
CTCF HAP1 WaplKO-33_SCC4KO GEO Homo sapiens GSE94992 44,152
CTCF MCF-10A GEO Homo sapiens GSE98551 56,648
CTCF THP-1 macrophage_PMA GEO Homo sapiens GSE96800 78,669
CTCF THP-1 monocytes GEO Homo sapiens GSE96800 83,214
CTCF HUES-64 GEO Homo sapiens GSE97394 35,899
CTCF HUES-64 DNMT-KO GEO Homo sapiens GSE97394 42,396
CTCF MCF-10AT1 GEO Homo sapiens GSE98551 43,625
CTCF MCF-10CA1a GEO Homo sapiens GSE98551 38,510
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

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AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.